Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 AF106564.1-201ENST00000607058 2553 ntBASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV26-1A0A087WT03 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV26-1A0A087WT03 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MIR6724-1-201ENST00000616420 92 ntBASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MIR6724-2-201ENST00000616483 92 ntBASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MIR6724-4-201ENST00000617390 92 ntBASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MIR6724-3-201ENST00000622482 92 ntBASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV26-1A0A087WT03 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 AC005703.6-201ENST00000623265 1329 ntBASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 AC131212.1-201ENST00000613771 668 ntBASIC16.02■□□□□ 0.16
TRAV26-1A0A087WT03 AC004812.2-201ENST00000611079 2094 ntBASIC16.02■□□□□ 0.15
TRAV26-1A0A087WT03 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV26-1A0A087WT03 ALDH1A3-203ENST00000557963 1670 ntBASIC16.02■□□□□ 0.15
TRAV26-1A0A087WT03 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV26-1A0A087WT03 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV26-1A0A087WT03 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV26-1A0A087WT03 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms