Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV30A0A087WSZ9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 AL033527.3-201ENST00000566366 1196 ntBASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV30A0A087WSZ9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV30A0A087WSZ9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAV30A0A087WSZ9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV30A0A087WSZ9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRAV30A0A087WSZ9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV30A0A087WSZ9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 C9orf163-202ENST00000624034 2573 ntBASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV30A0A087WSZ9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 AC137630.3-201ENST00000607245 391 ntBASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV30A0A087WSZ9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 AL121603.2-201ENST00000557373 2117 ntBASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV30A0A087WSZ9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 AC103834.1-201ENST00000520383 144 ntBASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 AC103724.3-201ENST00000564481 992 ntBASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 AC079630.1-202ENST00000618127 1840 ntBASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV30A0A087WSZ9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV30A0A087WSZ9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms