Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 AC090877.2-201ENST00000558441 1738 ntBASIC16.07■□□□□ 0.16
TRBV25-1A0A075B6N4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV25-1A0A075B6N4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV25-1A0A075B6N4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV25-1A0A075B6N4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV25-1A0A075B6N4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV25-1A0A075B6N4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 AC087393.1-201ENST00000582896 145 ntBASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV25-1A0A075B6N4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV25-1A0A075B6N4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 RARRES2P2-201ENST00000394842 485 ntBASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV25-1A0A075B6N4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 DUX4L9-201ENST00000449051 1259 ntBASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV25-1A0A075B6N4 AL161729.1-201ENST00000604104 1402 ntBASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 SPCS2P3-201ENST00000500401 656 ntBASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TRBV25-1A0A075B6N4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV25-1A0A075B6N4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV25-1A0A075B6N4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV25-1A0A075B6N4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV25-1A0A075B6N4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV25-1A0A075B6N4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRBV25-1A0A075B6N4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV25-1A0A075B6N4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms