Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Trim16Q99PP9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim16Q99PP9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim16Q99PP9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Trim16Q99PP9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim16Q99PP9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim16Q99PP9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trim16Q99PP9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim16Q99PP9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim16Q99PP9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim16Q99PP9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trim16Q99PP9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Trim16Q99PP9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim16Q99PP9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trim16Q99PP9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim16Q99PP9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Trim16Q99PP9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim16Q99PP9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim16Q99PP9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.91■■□□□ 1.58
Trim16Q99PP9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trim16Q99PP9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim16Q99PP9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.89■■□□□ 1.57
Trim16Q99PP9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim16Q99PP9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trim16Q99PP9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trim16Q99PP9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim16Q99PP9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trim16Q99PP9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.82■■□□□ 1.56
Trim16Q99PP9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trim16Q99PP9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim16Q99PP9 Gm24804-201ENSMUST00000174982 85 ntBASIC24.8■■□□□ 1.56
Trim16Q99PP9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim16Q99PP9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim16Q99PP9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Trim16Q99PP9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Trim16Q99PP9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Trim16Q99PP9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim16Q99PP9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim16Q99PP9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim16Q99PP9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Trim16Q99PP9 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.7■■□□□ 1.54
Trim16Q99PP9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Trim16Q99PP9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim16Q99PP9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trim16Q99PP9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.66■■□□□ 1.54
Trim16Q99PP9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim16Q99PP9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim16Q99PP9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Trim16Q99PP9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.63■■□□□ 1.53
Trim16Q99PP9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim16Q99PP9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trim16Q99PP9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Trim16Q99PP9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim16Q99PP9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trim16Q99PP9 Peli2-204ENSMUST00000226513 1320 ntBASIC24.61■■□□□ 1.53
Trim16Q99PP9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.6■■□□□ 1.53
Trim16Q99PP9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim16Q99PP9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Zxda-201ENSMUST00000117281 2621 ntBASIC24.59■■□□□ 1.53
Trim16Q99PP9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim16Q99PP9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
Trim16Q99PP9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trim16Q99PP9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trim16Q99PP9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim16Q99PP9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim16Q99PP9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
Trim16Q99PP9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim16Q99PP9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.53■■□□□ 1.52
Trim16Q99PP9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Trim16Q99PP9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim16Q99PP9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim16Q99PP9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.5■■□□□ 1.51
Trim16Q99PP9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim16Q99PP9 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.5■■□□□ 1.51
Trim16Q99PP9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim16Q99PP9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim16Q99PP9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim16Q99PP9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim16Q99PP9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Trim16Q99PP9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim16Q99PP9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trim16Q99PP9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim16Q99PP9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim16Q99PP9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Trim16Q99PP9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Trim16Q99PP9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim16Q99PP9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trim16Q99PP9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim16Q99PP9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim16Q99PP9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim16Q99PP9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim16Q99PP9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim16Q99PP9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.33■■□□□ 1.48
Trim16Q99PP9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Trim16Q99PP9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim16Q99PP9 Gm16148-201ENSMUST00000119653 893 ntBASIC24.31■■□□□ 1.48
Trim16Q99PP9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim16Q99PP9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms