Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31,19■■■□□ 2,58
Shisa4Q8CA71 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31,16■■■□□ 2,58
Shisa4Q8CA71 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31,16■■■□□ 2,58
Shisa4Q8CA71 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31,15■■■□□ 2,58
Shisa4Q8CA71 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Shisa4Q8CA71 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Shisa4Q8CA71 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31,11■■■□□ 2,57
Shisa4Q8CA71 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31,08■■■□□ 2,57
Shisa4Q8CA71 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Shisa4Q8CA71 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31,05■■■□□ 2,56
Shisa4Q8CA71 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,04■■■□□ 2,56
Shisa4Q8CA71 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
Shisa4Q8CA71 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Shisa4Q8CA71 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31,01■■■□□ 2,55
Shisa4Q8CA71 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31■■■□□ 2,55
Shisa4Q8CA71 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31■■■□□ 2,55
Shisa4Q8CA71 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30,96■■■□□ 2,55
Shisa4Q8CA71 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Shisa4Q8CA71 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
Shisa4Q8CA71 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30,94■■■□□ 2,54
Shisa4Q8CA71 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Shisa4Q8CA71 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Shisa4Q8CA71 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Shisa4Q8CA71 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30,89■■■□□ 2,54
Shisa4Q8CA71 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Shisa4Q8CA71 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30,88■■■□□ 2,53
Shisa4Q8CA71 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30,88■■■□□ 2,53
Shisa4Q8CA71 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30,88■■■□□ 2,53
Shisa4Q8CA71 Peli2-204ENSMUST00000226513 1320 ntBASIC30,87■■■□□ 2,53
Shisa4Q8CA71 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30,83■■■□□ 2,53
Shisa4Q8CA71 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Shisa4Q8CA71 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Shisa4Q8CA71 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Shisa4Q8CA71 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Shisa4Q8CA71 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30,76■■■□□ 2,51
Shisa4Q8CA71 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30,75■■■□□ 2,51
Shisa4Q8CA71 Zfp131-205ENSMUST00000223812 663 ntBASIC30,75■■■□□ 2,51
Shisa4Q8CA71 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Shisa4Q8CA71 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30,75■■■□□ 2,51
Shisa4Q8CA71 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30,74■■■□□ 2,51
Shisa4Q8CA71 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Shisa4Q8CA71 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30,73■■■□□ 2,51
Shisa4Q8CA71 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30,73■■■□□ 2,51
Shisa4Q8CA71 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30,73■■■□□ 2,51
Shisa4Q8CA71 Gm6658-202ENSMUST00000209493 1885 ntBASIC30,72■■■□□ 2,51
Shisa4Q8CA71 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30,69■■■□□ 2,5
Shisa4Q8CA71 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Shisa4Q8CA71 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Shisa4Q8CA71 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Shisa4Q8CA71 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30,61■■■□□ 2,49
Shisa4Q8CA71 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Shisa4Q8CA71 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30,6■■■□□ 2,49
Shisa4Q8CA71 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30,6■■■□□ 2,49
Shisa4Q8CA71 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30,58■■■□□ 2,49
Shisa4Q8CA71 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Shisa4Q8CA71 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30,57■■■□□ 2,48
Shisa4Q8CA71 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Shisa4Q8CA71 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30,55■■■□□ 2,48
Shisa4Q8CA71 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30,53■■■□□ 2,48
Shisa4Q8CA71 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Shisa4Q8CA71 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30,49■■■□□ 2,47
Shisa4Q8CA71 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Shisa4Q8CA71 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30,49■■■□□ 2,47
Shisa4Q8CA71 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Shisa4Q8CA71 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30,47■■■□□ 2,47
Shisa4Q8CA71 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30,46■■■□□ 2,47
Shisa4Q8CA71 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Shisa4Q8CA71 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Shisa4Q8CA71 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30,43■■■□□ 2,46
Shisa4Q8CA71 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Shisa4Q8CA71 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Shisa4Q8CA71 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30,42■■■□□ 2,46
Shisa4Q8CA71 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30,41■■■□□ 2,46
Shisa4Q8CA71 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30,4■■■□□ 2,46
Shisa4Q8CA71 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Shisa4Q8CA71 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Shisa4Q8CA71 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30,39■■■□□ 2,46
Shisa4Q8CA71 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30,39■■■□□ 2,45
Shisa4Q8CA71 Gm16148-201ENSMUST00000119653 893 ntBASIC30,35■■■□□ 2,45
Shisa4Q8CA71 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30,35■■■□□ 2,45
Shisa4Q8CA71 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,35■■■□□ 2,45
Shisa4Q8CA71 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30,34■■■□□ 2,45
Shisa4Q8CA71 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Shisa4Q8CA71 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30,33■■■□□ 2,45
Shisa4Q8CA71 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Shisa4Q8CA71 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Shisa4Q8CA71 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30,32■■■□□ 2,44
Shisa4Q8CA71 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30,31■■■□□ 2,44
Shisa4Q8CA71 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30,3■■■□□ 2,44
Shisa4Q8CA71 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30,3■■■□□ 2,44
Shisa4Q8CA71 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30,29■■■□□ 2,44
Shisa4Q8CA71 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30,28■■■□□ 2,44
Shisa4Q8CA71 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Shisa4Q8CA71 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Shisa4Q8CA71 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30,26■■■□□ 2,43
Shisa4Q8CA71 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
Shisa4Q8CA71 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30,24■■■□□ 2,43
Shisa4Q8CA71 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Shisa4Q8CA71 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Shisa4Q8CA71 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms