Protein–RNA interactions for Protein: Q3E7C1

TFB5, General transcription and DNA repair factor IIH subunit TFB5, yeastyeast

Predicted RBP Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFB5Q3E7C1 BMT6YLR063W 1098 nt9.35□□□□□ -0.91
TFB5Q3E7C1 FRD1YEL047C 1413 nt9.34□□□□□ -0.91
TFB5Q3E7C1 YKR040CYKR040C 504 nt9.33□□□□□ -0.92
TFB5Q3E7C1 DDR2YOL052C-A 186 nt9.33□□□□□ -0.92
TFB5Q3E7C1 GAL1YBR020W 1587 nt9.33□□□□□ -0.92
TFB5Q3E7C1 TRM5YHR070W 1500 nt9.31□□□□□ -0.92
TFB5Q3E7C1 WSC2YNL283C 1512 nt9.31□□□□□ -0.92
TFB5Q3E7C1 YDL086C-AYDL086C-A 435 nt9.3□□□□□ -0.92
TFB5Q3E7C1 YKR005CYKR005C 1578 nt9.29□□□□□ -0.92
TFB5Q3E7C1 YPR011CYPR011C 981 nt9.29□□□□□ -0.92
TFB5Q3E7C1 NAR1YNL240C 1476 nt9.28□□□□□ -0.92
TFB5Q3E7C1 BNA2YJR078W 1362 nt9.28□□□□□ -0.92
TFB5Q3E7C1 DIC1YLR348C 897 nt9.28□□□□□ -0.92
TFB5Q3E7C1 AQY1YPR192W 918 nt9.28□□□□□ -0.92
TFB5Q3E7C1 ANP1YEL036C 1503 nt9.27□□□□□ -0.93
TFB5Q3E7C1 MIC12YBR262C 321 nt9.27□□□□□ -0.93
TFB5Q3E7C1 LPX1YOR084W 1164 nt9.25□□□□□ -0.93
TFB5Q3E7C1 YCL074WYCL074W 927 nt9.23□□□□□ -0.93
TFB5Q3E7C1 tM(CAU)CtM(CAU)C 72 nt9.22□□□□□ -0.93
TFB5Q3E7C1 IMT4tM(CAU)E 72 nt9.22□□□□□ -0.93
TFB5Q3E7C1 IMT3tM(CAU)J3 72 nt9.22□□□□□ -0.93
TFB5Q3E7C1 IMT1tM(CAU)O1 72 nt9.22□□□□□ -0.93
TFB5Q3E7C1 IMT2tM(CAU)P 72 nt9.22□□□□□ -0.93
TFB5Q3E7C1 BIO5YNR056C 1686 nt9.21□□□□□ -0.93
TFB5Q3E7C1 IRC24YIR036C 792 nt9.2□□□□□ -0.94
TFB5Q3E7C1 SNF1YDR477W 1902 nt9.2□□□□□ -0.94
TFB5Q3E7C1 YGR259CYGR259C 441 nt9.19□□□□□ -0.94
TFB5Q3E7C1 DUS1YML080W 1272 nt9.19□□□□□ -0.94
TFB5Q3E7C1 AGP1YCL025C 1902 nt9.19□□□□□ -0.94
TFB5Q3E7C1 SPC25YER018C 666 nt9.17□□□□□ -0.94
TFB5Q3E7C1 CYT2YKL087C 675 nt9.17□□□□□ -0.94
TFB5Q3E7C1 PBP1YGR178C 2169 nt9.16□□□□□ -0.94
TFB5Q3E7C1 YDR524C-BYDR524C-B 201 nt9.16□□□□□ -0.94
TFB5Q3E7C1 STB1YNL309W 1263 nt9.16□□□□□ -0.94
TFB5Q3E7C1 FEN2YCR028C 1539 nt9.15□□□□□ -0.95
TFB5Q3E7C1 HHO1YPL127C 777 nt9.14□□□□□ -0.95
TFB5Q3E7C1 GPI16YHR188C 1833 nt9.14□□□□□ -0.95
TFB5Q3E7C1 YGR201CYGR201C 678 nt9.11□□□□□ -0.95
TFB5Q3E7C1 YIR016WYIR016W 798 nt9.08□□□□□ -0.96
TFB5Q3E7C1 TIM23YNR017W 669 nt9.07□□□□□ -0.96
TFB5Q3E7C1 YLR235CYLR235C 399 nt9.06□□□□□ -0.96
TFB5Q3E7C1 XDJ1YLR090W 1380 nt9.05□□□□□ -0.96
TFB5Q3E7C1 VPS60YDR486C 690 nt9.04□□□□□ -0.96
TFB5Q3E7C1 YLR179CYLR179C 606 nt9.04□□□□□ -0.96
TFB5Q3E7C1 BSP1YPR171W 1731 nt9.04□□□□□ -0.96
TFB5Q3E7C1 CCT4YDL143W 1587 nt9.03□□□□□ -0.96
TFB5Q3E7C1 STR3YGL184C 1398 nt9.02□□□□□ -0.97
TFB5Q3E7C1 RDN18-1RDN18-1 1800 nt9.01□□□□□ -0.97
TFB5Q3E7C1 RDN18-2RDN18-2 1800 nt9.01□□□□□ -0.97
TFB5Q3E7C1 SSN3YPL042C 1668 nt9□□□□□ -0.97
TFB5Q3E7C1 AHT1YHR093W 549 nt8.99□□□□□ -0.97
TFB5Q3E7C1 PTH1YHR189W 573 nt8.99□□□□□ -0.97
TFB5Q3E7C1 RTN2YDL204W 1182 nt8.98□□□□□ -0.97
TFB5Q3E7C1 ALG3YBL082C 1377 nt8.98□□□□□ -0.97
TFB5Q3E7C1 CMP2YML057W 1815 nt8.97□□□□□ -0.97
TFB5Q3E7C1 SWC5YBR231C 912 nt8.97□□□□□ -0.97
TFB5Q3E7C1 GOR1YNL274C 1053 nt8.92□□□□□ -0.98
TFB5Q3E7C1 DUT1YBR252W 444 nt8.91□□□□□ -0.98
TFB5Q3E7C1 AQY2YLL052C 450 nt8.9□□□□□ -0.98
TFB5Q3E7C1 YPR064WYPR064W 420 nt8.9□□□□□ -0.98
TFB5Q3E7C1 AVT6YER119C 1347 nt8.89□□□□□ -0.99
TFB5Q3E7C1 NDI1YML120C 1542 nt8.89□□□□□ -0.99
TFB5Q3E7C1 YKL030WYKL030W 606 nt8.88□□□□□ -0.99
TFB5Q3E7C1 GDH3YAL062W 1374 nt8.86□□□□□ -0.99
TFB5Q3E7C1 YAT1YAR035W 2064 nt8.85□□□□□ -0.99
TFB5Q3E7C1 TAD3YLR316C 969 nt8.83□□□□□ -1
TFB5Q3E7C1 SPP1YPL138C 1062 nt8.82□□□□□ -1
TFB5Q3E7C1 UBX6YJL048C 1191 nt8.81□□□□□ -1
TFB5Q3E7C1 HSL7YBR133C 2484 nt8.79□□□□□ -1
TFB5Q3E7C1 DAT1YML113W 747 nt8.77□□□□□ -1.01
TFB5Q3E7C1 SPT20YOL148C 1815 nt8.77□□□□□ -1.01
TFB5Q3E7C1 SHM2YLR058C 1410 nt8.74□□□□□ -1.01
TFB5Q3E7C1 ARP6YLR085C 1317 nt8.74□□□□□ -1.01
TFB5Q3E7C1 BDH1YAL060W 1149 nt8.73□□□□□ -1.01
TFB5Q3E7C1 YLR415CYLR415C 339 nt8.73□□□□□ -1.01
TFB5Q3E7C1 INA1YLR413W 2028 nt8.73□□□□□ -1.01
TFB5Q3E7C1 ALD4YOR374W 1560 nt8.73□□□□□ -1.01
TFB5Q3E7C1 PLB1YMR008C 1995 nt8.72□□□□□ -1.01
TFB5Q3E7C1 TIM17YJL143W 477 nt8.72□□□□□ -1.01
TFB5Q3E7C1 HIF1YLL022C 1158 nt8.72□□□□□ -1.01
TFB5Q3E7C1 NBP35YGL091C 987 nt8.69□□□□□ -1.02
TFB5Q3E7C1 YCR102CYCR102C 1107 nt8.68□□□□□ -1.02
TFB5Q3E7C1 RPC82YPR190C 1965 nt8.67□□□□□ -1.02
TFB5Q3E7C1 RDN25-1RDN25-1 3396 nt8.67□□□□□ -1.02
TFB5Q3E7C1 RDN25-2RDN25-2 3396 nt8.67□□□□□ -1.02
TFB5Q3E7C1 PRM5YIL117C 957 nt8.66□□□□□ -1.02
TFB5Q3E7C1 NIT1YIL164C 600 nt8.65□□□□□ -1.02
TFB5Q3E7C1 YDR510C-AYDR510C-A 117 nt8.63□□□□□ -1.03
TFB5Q3E7C1 tL(GAG)GtL(GAG)G 82 nt8.62□□□□□ -1.03
TFB5Q3E7C1 GID7YCL039W 2238 nt8.6□□□□□ -1.03
TFB5Q3E7C1 YSP3YOR003W 1437 nt8.6□□□□□ -1.03
TFB5Q3E7C1 ZRT3YKL175W 1512 nt8.59□□□□□ -1.03
TFB5Q3E7C1 SAM35YHR083W 990 nt8.59□□□□□ -1.03
TFB5Q3E7C1 LSC2YGR244C 1284 nt8.58□□□□□ -1.04
TFB5Q3E7C1 UTR1YJR049C 1593 nt8.57□□□□□ -1.04
TFB5Q3E7C1 SGT2YOR007C 1041 nt8.57□□□□□ -1.04
TFB5Q3E7C1 MAS1YLR163C 1389 nt8.56□□□□□ -1.04
TFB5Q3E7C1 TIR3YIL011W 810 nt8.53□□□□□ -1.04
TFB5Q3E7C1 GAP1YKR039W 1809 nt8.52□□□□□ -1.04
TFB5Q3E7C1 RTG1YOL067C 534 nt8.51□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 77.5 ms