Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 CRR1YLR213C 1269 nt11.38□□□□□ -0.59
DDC1Q08949 PIB2YGL023C 1908 nt11.38□□□□□ -0.59
DDC1Q08949 SPC25YER018C 666 nt11.37□□□□□ -0.59
DDC1Q08949 BOP3YNL042W 1191 nt11.36□□□□□ -0.59
DDC1Q08949 STB1YNL309W 1263 nt11.36□□□□□ -0.59
DDC1Q08949 YFL067WYFL067W 528 nt11.35□□□□□ -0.59
DDC1Q08949 RTF1YGL244W 1677 nt11.35□□□□□ -0.59
DDC1Q08949 PRE6YOL038W 765 nt11.34□□□□□ -0.59
DDC1Q08949 LYS4YDR234W 2082 nt11.34□□□□□ -0.59
DDC1Q08949 DDR2YOL052C-A 186 nt11.33□□□□□ -0.6
DDC1Q08949 YDR524C-BYDR524C-B 201 nt11.32□□□□□ -0.6
DDC1Q08949 PAU16YKL224C 372 nt11.32□□□□□ -0.6
DDC1Q08949 BDH1YAL060W 1149 nt11.32□□□□□ -0.6
DDC1Q08949 CCT4YDL143W 1587 nt11.31□□□□□ -0.6
DDC1Q08949 GPI16YHR188C 1833 nt11.3□□□□□ -0.6
DDC1Q08949 YDL086C-AYDL086C-A 435 nt11.29□□□□□ -0.6
DDC1Q08949 YSP3YOR003W 1437 nt11.28□□□□□ -0.6
DDC1Q08949 RRT5YFR032C 870 nt11.28□□□□□ -0.6
DDC1Q08949 PEX25YPL112C 1185 nt11.28□□□□□ -0.6
DDC1Q08949 ANP1YEL036C 1503 nt11.27□□□□□ -0.61
DDC1Q08949 VPS60YDR486C 690 nt11.26□□□□□ -0.61
DDC1Q08949 SNG1YGR197C 1644 nt11.26□□□□□ -0.61
DDC1Q08949 YFL066CYFL066C 1179 nt11.25□□□□□ -0.61
DDC1Q08949 YLR415CYLR415C 339 nt11.25□□□□□ -0.61
DDC1Q08949 HEM12YDR047W 1089 nt11.24□□□□□ -0.61
DDC1Q08949 MIC10YCL057C-A 294 nt11.23□□□□□ -0.61
DDC1Q08949 FEN2YCR028C 1539 nt11.23□□□□□ -0.61
DDC1Q08949 ALG3YBL082C 1377 nt11.22□□□□□ -0.61
DDC1Q08949 SWC5YBR231C 912 nt11.22□□□□□ -0.61
DDC1Q08949 YNL115CYNL115C 1935 nt11.21□□□□□ -0.62
DDC1Q08949 PTK1YKL198C 1989 nt11.19□□□□□ -0.62
DDC1Q08949 YIR016WYIR016W 798 nt11.12□□□□□ -0.63
DDC1Q08949 SPT8YLR055C 1809 nt11.1□□□□□ -0.63
DDC1Q08949 YHR056W-AYHR056W-A 435 nt11.09□□□□□ -0.63
DDC1Q08949 VPS75YNL246W 795 nt11.07□□□□□ -0.64
DDC1Q08949 MIC12YBR262C 321 nt11.02□□□□□ -0.65
DDC1Q08949 MIR1YJR077C 936 nt11□□□□□ -0.65
DDC1Q08949 NAT4YMR069W 858 nt11□□□□□ -0.65
DDC1Q08949 YFL054CYFL054C 1941 nt10.99□□□□□ -0.65
DDC1Q08949 BNA2YJR078W 1362 nt10.99□□□□□ -0.65
DDC1Q08949 SBA1YKL117W 651 nt10.98□□□□□ -0.65
DDC1Q08949 RAX1YOR301W 1308 nt10.98□□□□□ -0.65
DDC1Q08949 TIM17YJL143W 477 nt10.97□□□□□ -0.65
DDC1Q08949 GLK1YCL040W 1503 nt10.97□□□□□ -0.65
DDC1Q08949 SHM2YLR058C 1410 nt10.95□□□□□ -0.66
DDC1Q08949 XDJ1YLR090W 1380 nt10.95□□□□□ -0.66
DDC1Q08949 THI74YDR438W 1113 nt10.93□□□□□ -0.66
DDC1Q08949 MSF1YPR047W 1410 nt10.92□□□□□ -0.66
DDC1Q08949 YGR201CYGR201C 678 nt10.88□□□□□ -0.67
DDC1Q08949 NIT1YIL164C 600 nt10.87□□□□□ -0.67
DDC1Q08949 PAU7YAR020C 168 nt10.86□□□□□ -0.67
DDC1Q08949 HHO1YPL127C 777 nt10.86□□□□□ -0.67
DDC1Q08949 GDH3YAL062W 1374 nt10.86□□□□□ -0.67
DDC1Q08949 YJL225CYJL225C 5277 nt10.85□□□□□ -0.67
DDC1Q08949 SGT2YOR007C 1041 nt10.84□□□□□ -0.67
DDC1Q08949 DAT1YML113W 747 nt10.83□□□□□ -0.68
DDC1Q08949 SHB17YKR043C 816 nt10.81□□□□□ -0.68
DDC1Q08949 UBA4YHR111W 1323 nt10.8□□□□□ -0.68
DDC1Q08949 CCA1YER168C 1641 nt10.79□□□□□ -0.68
DDC1Q08949 SWE1YJL187C 2460 nt10.79□□□□□ -0.68
DDC1Q08949 AGP1YCL025C 1902 nt10.78□□□□□ -0.68
DDC1Q08949 YDR010CYDR010C 333 nt10.77□□□□□ -0.69
DDC1Q08949 AVT6YER119C 1347 nt10.76□□□□□ -0.69
DDC1Q08949 YGL034CYGL034C 366 nt10.73□□□□□ -0.69
DDC1Q08949 YSR3YKR053C 1215 nt10.72□□□□□ -0.69
DDC1Q08949 DUT1YBR252W 444 nt10.7□□□□□ -0.7
DDC1Q08949 RET2YFR051C 1641 nt10.69□□□□□ -0.7
DDC1Q08949 GOR1YNL274C 1053 nt10.69□□□□□ -0.7
DDC1Q08949 XYL2YLR070C 1071 nt10.65□□□□□ -0.7
DDC1Q08949 PHO89YBR296C 1725 nt10.64□□□□□ -0.71
DDC1Q08949 YCR102CYCR102C 1107 nt10.63□□□□□ -0.71
DDC1Q08949 YCR087WYCR087W 516 nt10.61□□□□□ -0.71
DDC1Q08949 YMR244WYMR244W 1068 nt10.6□□□□□ -0.71
DDC1Q08949 RDN37-1RDN37-1 5354 nt10.58□□□□□ -0.72
DDC1Q08949 RDN37-2RDN37-2 5354 nt10.58□□□□□ -0.72
DDC1Q08949 GLR1YPL091W 1452 nt10.57□□□□□ -0.72
DDC1Q08949 RBG1YAL036C 1110 nt10.57□□□□□ -0.72
DDC1Q08949 AIM45YPR004C 1035 nt10.57□□□□□ -0.72
DDC1Q08949 NDI1YML120C 1542 nt10.56□□□□□ -0.72
DDC1Q08949 SFA1YDL168W 1161 nt10.55□□□□□ -0.72
DDC1Q08949 DUS1YML080W 1272 nt10.54□□□□□ -0.72
DDC1Q08949 NBP35YGL091C 987 nt10.53□□□□□ -0.72
DDC1Q08949 Q0182Q0182 405 nt10.53□□□□□ -0.72
DDC1Q08949 COQ2YNR041C 1119 nt10.53□□□□□ -0.72
DDC1Q08949 STR3YGL184C 1398 nt10.51□□□□□ -0.73
DDC1Q08949 MRP20YDR405W 792 nt10.5□□□□□ -0.73
DDC1Q08949 RDN18-1RDN18-1 1800 nt10.49□□□□□ -0.73
DDC1Q08949 RDN18-2RDN18-2 1800 nt10.49□□□□□ -0.73
DDC1Q08949 YHL019W-AYHL019W-A 594 nt10.49□□□□□ -0.73
DDC1Q08949 SHH4YLR164W 507 nt10.49□□□□□ -0.73
DDC1Q08949 YCL074WYCL074W 927 nt10.48□□□□□ -0.73
DDC1Q08949 TIR3YIL011W 810 nt10.47□□□□□ -0.73
DDC1Q08949 UME6YDR207C 2511 nt10.45□□□□□ -0.74
DDC1Q08949 AQY2YLL052C 450 nt10.44□□□□□ -0.74
DDC1Q08949 FUR4YBR021W 1902 nt10.41□□□□□ -0.74
DDC1Q08949 RBG2YGR173W 1107 nt10.41□□□□□ -0.74
DDC1Q08949 RPL4BYDR012W 1089 nt10.4□□□□□ -0.74
DDC1Q08949 RPL4AYBR031W 1089 nt10.4□□□□□ -0.74
DDC1Q08949 POM34YLR018C 900 nt10.38□□□□□ -0.75
DDC1Q08949 TOM6YOR045W 186 nt10.37□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 37.7 ms