Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 RAX1YOR301W 1308 nt9.11□□□□□ -0.95
HRD1Q08109 SNG1YGR197C 1644 nt9.1□□□□□ -0.95
HRD1Q08109 PTH1YHR189W 573 nt9.1□□□□□ -0.95
HRD1Q08109 MIC10YCL057C-A 294 nt9.1□□□□□ -0.95
HRD1Q08109 YDL086C-AYDL086C-A 435 nt9.08□□□□□ -0.96
HRD1Q08109 TIM23YNR017W 669 nt9.07□□□□□ -0.96
HRD1Q08109 SPP1YPL138C 1062 nt9.07□□□□□ -0.96
HRD1Q08109 MOT3YMR070W 1473 nt9.07□□□□□ -0.96
HRD1Q08109 BNA2YJR078W 1362 nt9.05□□□□□ -0.96
HRD1Q08109 YLR179CYLR179C 606 nt9.05□□□□□ -0.96
HRD1Q08109 STB1YNL309W 1263 nt9.02□□□□□ -0.97
HRD1Q08109 ANP1YEL036C 1503 nt9.01□□□□□ -0.97
HRD1Q08109 YDR524C-BYDR524C-B 201 nt9.01□□□□□ -0.97
HRD1Q08109 YKL030WYKL030W 606 nt9.01□□□□□ -0.97
HRD1Q08109 SPC25YER018C 666 nt9□□□□□ -0.97
HRD1Q08109 GPI16YHR188C 1833 nt9□□□□□ -0.97
HRD1Q08109 CCA1YER168C 1641 nt8.98□□□□□ -0.97
HRD1Q08109 FEN2YCR028C 1539 nt8.96□□□□□ -0.97
HRD1Q08109 HSL7YBR133C 2484 nt8.95□□□□□ -0.98
HRD1Q08109 HSP60YLR259C 1719 nt8.95□□□□□ -0.98
HRD1Q08109 YPR064WYPR064W 420 nt8.95□□□□□ -0.98
HRD1Q08109 GLK1YCL040W 1503 nt8.94□□□□□ -0.98
HRD1Q08109 RDN25-1RDN25-1 3396 nt8.93□□□□□ -0.98
HRD1Q08109 RDN25-2RDN25-2 3396 nt8.93□□□□□ -0.98
HRD1Q08109 AHT1YHR093W 549 nt8.93□□□□□ -0.98
HRD1Q08109 FUR4YBR021W 1902 nt8.92□□□□□ -0.98
HRD1Q08109 CCT4YDL143W 1587 nt8.92□□□□□ -0.98
HRD1Q08109 HHO1YPL127C 777 nt8.91□□□□□ -0.98
HRD1Q08109 SWC5YBR231C 912 nt8.91□□□□□ -0.98
HRD1Q08109 MIC12YBR262C 321 nt8.91□□□□□ -0.98
HRD1Q08109 VPS60YDR486C 690 nt8.9□□□□□ -0.98
HRD1Q08109 YIR016WYIR016W 798 nt8.89□□□□□ -0.99
HRD1Q08109 WSC2YNL283C 1512 nt8.89□□□□□ -0.99
HRD1Q08109 TAD3YLR316C 969 nt8.86□□□□□ -0.99
HRD1Q08109 DUS1YML080W 1272 nt8.85□□□□□ -0.99
HRD1Q08109 YGR201CYGR201C 678 nt8.82□□□□□ -1
HRD1Q08109 ALG3YBL082C 1377 nt8.82□□□□□ -1
HRD1Q08109 PRP4YPR178W 1398 nt8.81□□□□□ -1
HRD1Q08109 NAR1YNL240C 1476 nt8.8□□□□□ -1
HRD1Q08109 YCL074WYCL074W 927 nt8.79□□□□□ -1
HRD1Q08109 YEL076C-AYEL076C-A 651 nt8.79□□□□□ -1
HRD1Q08109 YEL076CYEL076C 651 nt8.79□□□□□ -1
HRD1Q08109 YLR464WYLR464W 651 nt8.79□□□□□ -1
HRD1Q08109 RTG1YOL067C 534 nt8.79□□□□□ -1
HRD1Q08109 BMT6YLR063W 1098 nt8.78□□□□□ -1
HRD1Q08109 AGP1YCL025C 1902 nt8.78□□□□□ -1
HRD1Q08109 tL(GAG)GtL(GAG)G 82 nt8.75□□□□□ -1.01
HRD1Q08109 HUA1YGR268C 597 nt8.75□□□□□ -1.01
HRD1Q08109 YLR415CYLR415C 339 nt8.75□□□□□ -1.01
HRD1Q08109 AAC1YMR056C 930 nt8.74□□□□□ -1.01
HRD1Q08109 DPS1YLL018C 1674 nt8.74□□□□□ -1.01
HRD1Q08109 CMP2YML057W 1815 nt8.73□□□□□ -1.01
HRD1Q08109 GOR1YNL274C 1053 nt8.73□□□□□ -1.01
HRD1Q08109 YKR005CYKR005C 1578 nt8.73□□□□□ -1.01
HRD1Q08109 XDJ1YLR090W 1380 nt8.73□□□□□ -1.01
HRD1Q08109 HEL2YDR266C 1920 nt8.72□□□□□ -1.01
HRD1Q08109 GDH3YAL062W 1374 nt8.72□□□□□ -1.01
HRD1Q08109 AVT6YER119C 1347 nt8.71□□□□□ -1.02
HRD1Q08109 MET2YNL277W 1461 nt8.7□□□□□ -1.02
HRD1Q08109 YGR259CYGR259C 441 nt8.69□□□□□ -1.02
HRD1Q08109 BDH1YAL060W 1149 nt8.69□□□□□ -1.02
HRD1Q08109 ADO1YJR105W 1023 nt8.67□□□□□ -1.02
HRD1Q08109 MRPL8YJL063C 717 nt8.66□□□□□ -1.02
HRD1Q08109 TIM17YJL143W 477 nt8.66□□□□□ -1.02
HRD1Q08109 STR3YGL184C 1398 nt8.65□□□□□ -1.02
HRD1Q08109 SSN3YPL042C 1668 nt8.65□□□□□ -1.03
HRD1Q08109 AQY2YLL052C 450 nt8.64□□□□□ -1.03
HRD1Q08109 DUT1YBR252W 444 nt8.63□□□□□ -1.03
HRD1Q08109 YAT1YAR035W 2064 nt8.63□□□□□ -1.03
HRD1Q08109 SHM2YLR058C 1410 nt8.63□□□□□ -1.03
HRD1Q08109 GID7YCL039W 2238 nt8.61□□□□□ -1.03
HRD1Q08109 IRC24YIR036C 792 nt8.61□□□□□ -1.03
HRD1Q08109 SFP1YLR403W 2052 nt8.61□□□□□ -1.03
HRD1Q08109 RDN18-1RDN18-1 1800 nt8.61□□□□□ -1.03
HRD1Q08109 RDN18-2RDN18-2 1800 nt8.61□□□□□ -1.03
HRD1Q08109 YSP3YOR003W 1437 nt8.6□□□□□ -1.03
HRD1Q08109 NPP1YCR026C 2229 nt8.57□□□□□ -1.04
HRD1Q08109 RTN2YDL204W 1182 nt8.55□□□□□ -1.04
HRD1Q08109 DAT1YML113W 747 nt8.54□□□□□ -1.04
HRD1Q08109 YNL115CYNL115C 1935 nt8.54□□□□□ -1.04
HRD1Q08109 PBP1YGR178C 2169 nt8.53□□□□□ -1.04
HRD1Q08109 SNF1YDR477W 1902 nt8.52□□□□□ -1.04
HRD1Q08109 YCR102CYCR102C 1107 nt8.52□□□□□ -1.05
HRD1Q08109 PEX25YPL112C 1185 nt8.52□□□□□ -1.05
HRD1Q08109 NIT1YIL164C 600 nt8.5□□□□□ -1.05
HRD1Q08109 BIO5YNR056C 1686 nt8.49□□□□□ -1.05
HRD1Q08109 CYT2YKL087C 675 nt8.49□□□□□ -1.05
HRD1Q08109 SGT2YOR007C 1041 nt8.49□□□□□ -1.05
HRD1Q08109 VPS75YNL246W 795 nt8.48□□□□□ -1.05
HRD1Q08109 HMG2YLR450W 3138 nt8.44□□□□□ -1.06
HRD1Q08109 NBP35YGL091C 987 nt8.44□□□□□ -1.06
HRD1Q08109 YFL066CYFL066C 1179 nt8.43□□□□□ -1.06
HRD1Q08109 PAU7YAR020C 168 nt8.42□□□□□ -1.06
HRD1Q08109 YFR018CYFR018C 1092 nt8.41□□□□□ -1.06
HRD1Q08109 ARP6YLR085C 1317 nt8.39□□□□□ -1.07
HRD1Q08109 PLB1YMR008C 1995 nt8.39□□□□□ -1.07
HRD1Q08109 TPO4YOR273C 1980 nt8.36□□□□□ -1.07
HRD1Q08109 FRE6YLL051C 2139 nt8.36□□□□□ -1.07
HRD1Q08109 LSC2YGR244C 1284 nt8.34□□□□□ -1.07
HRD1Q08109 TIR3YIL011W 810 nt8.34□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms