Protein–RNA interactions for Protein: Q05775

HCR1, Eukaryotic translation initiation factor 3 subunit J, yeastyeast

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCR1Q05775 HEM12YDR047W 1089 nt12.18□□□□□ -0.46
HCR1Q05775 TRM5YHR070W 1500 nt12.16□□□□□ -0.46
HCR1Q05775 DDR2YOL052C-A 186 nt12.14□□□□□ -0.47
HCR1Q05775 SWE1YJL187C 2460 nt12.13□□□□□ -0.47
HCR1Q05775 TIM23YNR017W 669 nt12.13□□□□□ -0.47
HCR1Q05775 AQY1YPR192W 918 nt12.13□□□□□ -0.47
HCR1Q05775 MIC10YCL057C-A 294 nt12.13□□□□□ -0.47
HCR1Q05775 SNG1YGR197C 1644 nt12.12□□□□□ -0.47
HCR1Q05775 YHR056W-AYHR056W-A 435 nt12.12□□□□□ -0.47
HCR1Q05775 YDL086C-AYDL086C-A 435 nt12.08□□□□□ -0.48
HCR1Q05775 YLR179CYLR179C 606 nt12.08□□□□□ -0.48
HCR1Q05775 YKL030WYKL030W 606 nt12.07□□□□□ -0.48
HCR1Q05775 RAX1YOR301W 1308 nt12.04□□□□□ -0.48
HCR1Q05775 ANP1YEL036C 1503 nt12.03□□□□□ -0.48
HCR1Q05775 STB1YNL309W 1263 nt12.02□□□□□ -0.49
HCR1Q05775 YDR524C-BYDR524C-B 201 nt12□□□□□ -0.49
HCR1Q05775 SPC25YER018C 666 nt12□□□□□ -0.49
HCR1Q05775 AHT1YHR093W 549 nt11.97□□□□□ -0.49
HCR1Q05775 GPI16YHR188C 1833 nt11.97□□□□□ -0.49
HCR1Q05775 WSC2YNL283C 1512 nt11.96□□□□□ -0.49
HCR1Q05775 NVJ2YPR091C 2313 nt11.95□□□□□ -0.5
HCR1Q05775 FEN2YCR028C 1539 nt11.95□□□□□ -0.5
HCR1Q05775 YPR064WYPR064W 420 nt11.94□□□□□ -0.5
HCR1Q05775 BNA2YJR078W 1362 nt11.93□□□□□ -0.5
HCR1Q05775 CCA1YER168C 1641 nt11.91□□□□□ -0.5
HCR1Q05775 CCT4YDL143W 1587 nt11.91□□□□□ -0.5
HCR1Q05775 VPS60YDR486C 690 nt11.88□□□□□ -0.51
HCR1Q05775 SBA1YKL117W 651 nt11.88□□□□□ -0.51
HCR1Q05775 BOR1YNL275W 1731 nt11.87□□□□□ -0.51
HCR1Q05775 MIC12YBR262C 321 nt11.87□□□□□ -0.51
HCR1Q05775 TAD3YLR316C 969 nt11.85□□□□□ -0.51
HCR1Q05775 YIR016WYIR016W 798 nt11.84□□□□□ -0.51
HCR1Q05775 SWC5YBR231C 912 nt11.84□□□□□ -0.51
HCR1Q05775 ALG3YBL082C 1377 nt11.81□□□□□ -0.52
HCR1Q05775 PAU16YKL224C 372 nt11.79□□□□□ -0.52
HCR1Q05775 HSP60YLR259C 1719 nt11.78□□□□□ -0.52
HCR1Q05775 RRT5YFR032C 870 nt11.78□□□□□ -0.52
HCR1Q05775 FUR4YBR021W 1902 nt11.78□□□□□ -0.52
HCR1Q05775 HHO1YPL127C 777 nt11.77□□□□□ -0.53
HCR1Q05775 YFR018CYFR018C 1092 nt11.74□□□□□ -0.53
HCR1Q05775 GLK1YCL040W 1503 nt11.74□□□□□ -0.53
HCR1Q05775 tL(GAG)GtL(GAG)G 82 nt11.73□□□□□ -0.53
HCR1Q05775 AGP1YCL025C 1902 nt11.72□□□□□ -0.53
HCR1Q05775 YGR201CYGR201C 678 nt11.71□□□□□ -0.53
HCR1Q05775 BDH1YAL060W 1149 nt11.69□□□□□ -0.54
HCR1Q05775 YLR415CYLR415C 339 nt11.67□□□□□ -0.54
HCR1Q05775 DUS1YML080W 1272 nt11.65□□□□□ -0.54
HCR1Q05775 XDJ1YLR090W 1380 nt11.63□□□□□ -0.55
HCR1Q05775 YCL074WYCL074W 927 nt11.61□□□□□ -0.55
HCR1Q05775 GDH3YAL062W 1374 nt11.57□□□□□ -0.56
HCR1Q05775 PRP4YPR178W 1398 nt11.57□□□□□ -0.56
HCR1Q05775 YSP3YOR003W 1437 nt11.57□□□□□ -0.56
HCR1Q05775 AVT6YER119C 1347 nt11.56□□□□□ -0.56
HCR1Q05775 PRE6YOL038W 765 nt11.55□□□□□ -0.56
HCR1Q05775 GOR1YNL274C 1053 nt11.54□□□□□ -0.56
HCR1Q05775 TIM17YJL143W 477 nt11.53□□□□□ -0.56
HCR1Q05775 SHM2YLR058C 1410 nt11.52□□□□□ -0.56
HCR1Q05775 DUT1YBR252W 444 nt11.52□□□□□ -0.57
HCR1Q05775 YKR005CYKR005C 1578 nt11.51□□□□□ -0.57
HCR1Q05775 DPS1YLL018C 1674 nt11.51□□□□□ -0.57
HCR1Q05775 BMT6YLR063W 1098 nt11.48□□□□□ -0.57
HCR1Q05775 STR3YGL184C 1398 nt11.48□□□□□ -0.57
HCR1Q05775 RDN18-1RDN18-1 1800 nt11.48□□□□□ -0.57
HCR1Q05775 RDN18-2RDN18-2 1800 nt11.48□□□□□ -0.57
HCR1Q05775 NAT4YMR069W 858 nt11.47□□□□□ -0.57
HCR1Q05775 YNL115CYNL115C 1935 nt11.47□□□□□ -0.57
HCR1Q05775 PEX25YPL112C 1185 nt11.45□□□□□ -0.58
HCR1Q05775 YGR259CYGR259C 441 nt11.44□□□□□ -0.58
HCR1Q05775 AAC1YMR056C 930 nt11.44□□□□□ -0.58
HCR1Q05775 ALG12YNR030W 1656 nt11.43□□□□□ -0.58
HCR1Q05775 AQY2YLL052C 450 nt11.41□□□□□ -0.58
HCR1Q05775 NIT1YIL164C 600 nt11.4□□□□□ -0.58
HCR1Q05775 DAT1YML113W 747 nt11.39□□□□□ -0.59
HCR1Q05775 YFL066CYFL066C 1179 nt11.37□□□□□ -0.59
HCR1Q05775 VPS75YNL246W 795 nt11.36□□□□□ -0.59
HCR1Q05775 SGT2YOR007C 1041 nt11.35□□□□□ -0.59
HCR1Q05775 YCR102CYCR102C 1107 nt11.32□□□□□ -0.6
HCR1Q05775 IRC24YIR036C 792 nt11.32□□□□□ -0.6
HCR1Q05775 RTN2YDL204W 1182 nt11.31□□□□□ -0.6
HCR1Q05775 SNF1YDR477W 1902 nt11.31□□□□□ -0.6
HCR1Q05775 MSF1YPR047W 1410 nt11.27□□□□□ -0.6
HCR1Q05775 NBP35YGL091C 987 nt11.26□□□□□ -0.61
HCR1Q05775 YMR244WYMR244W 1068 nt11.24□□□□□ -0.61
HCR1Q05775 BIO5YNR056C 1686 nt11.22□□□□□ -0.61
HCR1Q05775 UME6YDR207C 2511 nt11.22□□□□□ -0.61
HCR1Q05775 PAU7YAR020C 168 nt11.2□□□□□ -0.62
HCR1Q05775 THI74YDR438W 1113 nt11.19□□□□□ -0.62
HCR1Q05775 ARP6YLR085C 1317 nt11.16□□□□□ -0.62
HCR1Q05775 PLB1YMR008C 1995 nt11.15□□□□□ -0.62
HCR1Q05775 GLR1YPL091W 1452 nt11.14□□□□□ -0.63
HCR1Q05775 MCH5YOR306C 1566 nt11.13□□□□□ -0.63
HCR1Q05775 MIR1YJR077C 936 nt11.12□□□□□ -0.63
HCR1Q05775 TIR3YIL011W 810 nt11.11□□□□□ -0.63
HCR1Q05775 NAR1YNL240C 1476 nt11.11□□□□□ -0.63
HCR1Q05775 LSC2YGR244C 1284 nt11.08□□□□□ -0.64
HCR1Q05775 SHB17YKR043C 816 nt11.08□□□□□ -0.64
HCR1Q05775 PBP1YGR178C 2169 nt11.08□□□□□ -0.64
HCR1Q05775 YDR010CYDR010C 333 nt11.07□□□□□ -0.64
HCR1Q05775 RBG2YGR173W 1107 nt11.04□□□□□ -0.64
HCR1Q05775 SHH4YLR164W 507 nt11.04□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 10.8 ms