Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 RTF1YGL244W 1677 nt12.7□□□□□ -0.38
UFD2P54860 CRR1YLR213C 1269 nt12.68□□□□□ -0.38
UFD2P54860 YFL067WYFL067W 528 nt12.64□□□□□ -0.39
UFD2P54860 STB1YNL309W 1263 nt12.64□□□□□ -0.39
UFD2P54860 LYS4YDR234W 2082 nt12.63□□□□□ -0.39
UFD2P54860 SPC25YER018C 666 nt12.63□□□□□ -0.39
UFD2P54860 YFR018CYFR018C 1092 nt12.63□□□□□ -0.39
UFD2P54860 NME1NME1 340 nt12.63□□□□□ -0.39
UFD2P54860 DDR2YOL052C-A 186 nt12.62□□□□□ -0.39
UFD2P54860 YDR524C-BYDR524C-B 201 nt12.6□□□□□ -0.39
UFD2P54860 CCT4YDL143W 1587 nt12.57□□□□□ -0.4
UFD2P54860 GPI16YHR188C 1833 nt12.56□□□□□ -0.4
UFD2P54860 YDL086C-AYDL086C-A 435 nt12.56□□□□□ -0.4
UFD2P54860 YFL015W-AYFL015W-A 318 nt12.56□□□□□ -0.4
UFD2P54860 BDH1YAL060W 1149 nt12.56□□□□□ -0.4
UFD2P54860 PRE6YOL038W 765 nt12.56□□□□□ -0.4
UFD2P54860 SNG1YGR197C 1644 nt12.55□□□□□ -0.4
UFD2P54860 PAU16YKL224C 372 nt12.54□□□□□ -0.4
UFD2P54860 ANP1YEL036C 1503 nt12.53□□□□□ -0.4
UFD2P54860 HEM12YDR047W 1089 nt12.53□□□□□ -0.4
UFD2P54860 VPS60YDR486C 690 nt12.53□□□□□ -0.4
UFD2P54860 MIC10YCL057C-A 294 nt12.53□□□□□ -0.4
UFD2P54860 PTK1YKL198C 1989 nt12.52□□□□□ -0.41
UFD2P54860 YSP3YOR003W 1437 nt12.51□□□□□ -0.41
UFD2P54860 PEX25YPL112C 1185 nt12.5□□□□□ -0.41
UFD2P54860 FEN2YCR028C 1539 nt12.49□□□□□ -0.41
UFD2P54860 YLR415CYLR415C 339 nt12.49□□□□□ -0.41
UFD2P54860 SWC5YBR231C 912 nt12.49□□□□□ -0.41
UFD2P54860 ALG3YBL082C 1377 nt12.48□□□□□ -0.41
UFD2P54860 YFL066CYFL066C 1179 nt12.48□□□□□ -0.41
UFD2P54860 RRT5YFR032C 870 nt12.48□□□□□ -0.41
UFD2P54860 YNL115CYNL115C 1935 nt12.45□□□□□ -0.42
UFD2P54860 YHR056W-AYHR056W-A 435 nt12.38□□□□□ -0.43
UFD2P54860 NVJ2YPR091C 2313 nt12.38□□□□□ -0.43
UFD2P54860 YIR016WYIR016W 798 nt12.36□□□□□ -0.43
UFD2P54860 SPT8YLR055C 1809 nt12.32□□□□□ -0.44
UFD2P54860 YFL054CYFL054C 1941 nt12.3□□□□□ -0.44
UFD2P54860 VPS75YNL246W 795 nt12.27□□□□□ -0.45
UFD2P54860 RAX1YOR301W 1308 nt12.26□□□□□ -0.45
UFD2P54860 YGR139WYGR139W 339 nt12.25□□□□□ -0.45
UFD2P54860 MIC12YBR262C 321 nt12.25□□□□□ -0.45
UFD2P54860 BNA2YJR078W 1362 nt12.25□□□□□ -0.45
UFD2P54860 TIM17YJL143W 477 nt12.2□□□□□ -0.46
UFD2P54860 XDJ1YLR090W 1380 nt12.19□□□□□ -0.46
UFD2P54860 MIR1YJR077C 936 nt12.19□□□□□ -0.46
UFD2P54860 NAT4YMR069W 858 nt12.18□□□□□ -0.46
UFD2P54860 SHM2YLR058C 1410 nt12.18□□□□□ -0.46
UFD2P54860 GLK1YCL040W 1503 nt12.16□□□□□ -0.46
UFD2P54860 YJL225CYJL225C 5277 nt12.14□□□□□ -0.47
UFD2P54860 THI74YDR438W 1113 nt12.11□□□□□ -0.47
UFD2P54860 HHO1YPL127C 777 nt12.11□□□□□ -0.47
UFD2P54860 YGR201CYGR201C 678 nt12.1□□□□□ -0.47
UFD2P54860 SBA1YKL117W 651 nt12.1□□□□□ -0.47
UFD2P54860 MSF1YPR047W 1410 nt12.1□□□□□ -0.47
UFD2P54860 GDH3YAL062W 1374 nt12.09□□□□□ -0.47
UFD2P54860 NIT1YIL164C 600 nt12.07□□□□□ -0.48
UFD2P54860 PAU7YAR020C 168 nt12.07□□□□□ -0.48
UFD2P54860 SWE1YJL187C 2460 nt12.06□□□□□ -0.48
UFD2P54860 SGT2YOR007C 1041 nt12.06□□□□□ -0.48
UFD2P54860 CCA1YER168C 1641 nt12.05□□□□□ -0.48
UFD2P54860 AGP1YCL025C 1902 nt12.02□□□□□ -0.49
UFD2P54860 DAT1YML113W 747 nt12.01□□□□□ -0.49
UFD2P54860 SHB17YKR043C 816 nt12□□□□□ -0.49
UFD2P54860 AVT6YER119C 1347 nt11.99□□□□□ -0.49
UFD2P54860 UBA4YHR111W 1323 nt11.97□□□□□ -0.49
UFD2P54860 YDR010CYDR010C 333 nt11.96□□□□□ -0.49
UFD2P54860 DUT1YBR252W 444 nt11.94□□□□□ -0.5
UFD2P54860 GOR1YNL274C 1053 nt11.91□□□□□ -0.5
UFD2P54860 YSR3YKR053C 1215 nt11.9□□□□□ -0.5
UFD2P54860 YGL034CYGL034C 366 nt11.89□□□□□ -0.51
UFD2P54860 RET2YFR051C 1641 nt11.86□□□□□ -0.51
UFD2P54860 YCR102CYCR102C 1107 nt11.82□□□□□ -0.52
UFD2P54860 XYL2YLR070C 1071 nt11.82□□□□□ -0.52
UFD2P54860 PHO89YBR296C 1725 nt11.82□□□□□ -0.52
UFD2P54860 DUS1YML080W 1272 nt11.8□□□□□ -0.52
UFD2P54860 YCR087WYCR087W 516 nt11.76□□□□□ -0.53
UFD2P54860 SFA1YDL168W 1161 nt11.73□□□□□ -0.53
UFD2P54860 RBG1YAL036C 1110 nt11.73□□□□□ -0.53
UFD2P54860 AIM45YPR004C 1035 nt11.72□□□□□ -0.53
UFD2P54860 NDI1YML120C 1542 nt11.71□□□□□ -0.53
UFD2P54860 STR3YGL184C 1398 nt11.71□□□□□ -0.53
UFD2P54860 NBP35YGL091C 987 nt11.71□□□□□ -0.53
UFD2P54860 RDN18-1RDN18-1 1800 nt11.71□□□□□ -0.54
UFD2P54860 RDN18-2RDN18-2 1800 nt11.71□□□□□ -0.54
UFD2P54860 RDN37-1RDN37-1 5354 nt11.71□□□□□ -0.54
UFD2P54860 RDN37-2RDN37-2 5354 nt11.71□□□□□ -0.54
UFD2P54860 YCL074WYCL074W 927 nt11.7□□□□□ -0.54
UFD2P54860 YMR244WYMR244W 1068 nt11.7□□□□□ -0.54
UFD2P54860 COQ2YNR041C 1119 nt11.69□□□□□ -0.54
UFD2P54860 GLR1YPL091W 1452 nt11.69□□□□□ -0.54
UFD2P54860 AQY2YLL052C 450 nt11.68□□□□□ -0.54
UFD2P54860 YHL019W-AYHL019W-A 594 nt11.67□□□□□ -0.54
UFD2P54860 SHH4YLR164W 507 nt11.67□□□□□ -0.54
UFD2P54860 MRP20YDR405W 792 nt11.66□□□□□ -0.54
UFD2P54860 FUR4YBR021W 1902 nt11.66□□□□□ -0.54
UFD2P54860 TIR3YIL011W 810 nt11.64□□□□□ -0.55
UFD2P54860 BOR1YNL275W 1731 nt11.59□□□□□ -0.55
UFD2P54860 POM34YLR018C 900 nt11.55□□□□□ -0.56
UFD2P54860 TOM6YOR045W 186 nt11.54□□□□□ -0.56
UFD2P54860 RPL4BYDR012W 1089 nt11.53□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms