Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 RNQ1YCL028W 1218 nt11.11□□□□□ -0.63
SUB1P54000 SNG1YGR197C 1644 nt11.1□□□□□ -0.63
SUB1P54000 PRP4YPR178W 1398 nt11.09□□□□□ -0.63
SUB1P54000 NPP1YCR026C 2229 nt11.07□□□□□ -0.64
SUB1P54000 FRD1YEL047C 1413 nt11.05□□□□□ -0.64
SUB1P54000 YEL076C-AYEL076C-A 651 nt11.05□□□□□ -0.64
SUB1P54000 YEL076CYEL076C 651 nt11.05□□□□□ -0.64
SUB1P54000 YLR464WYLR464W 651 nt11.05□□□□□ -0.64
SUB1P54000 YFL067WYFL067W 528 nt11.04□□□□□ -0.64
SUB1P54000 FTR1YER145C 1215 nt11.03□□□□□ -0.64
SUB1P54000 DTR1YBR180W 1719 nt11.03□□□□□ -0.64
SUB1P54000 ILV2YMR108W 2064 nt11.02□□□□□ -0.64
SUB1P54000 DPS1YLL018C 1674 nt11.02□□□□□ -0.64
SUB1P54000 TRM5YHR070W 1500 nt11.02□□□□□ -0.65
SUB1P54000 AAC1YMR056C 930 nt11.01□□□□□ -0.65
SUB1P54000 LPX1YOR084W 1164 nt11.01□□□□□ -0.65
SUB1P54000 GAL1YBR020W 1587 nt11.01□□□□□ -0.65
SUB1P54000 RSC4YKR008W 1878 nt11□□□□□ -0.65
SUB1P54000 YKR040CYKR040C 504 nt10.99□□□□□ -0.65
SUB1P54000 ERV46YAL042W 1248 nt10.98□□□□□ -0.65
SUB1P54000 DDR2YOL052C-A 186 nt10.98□□□□□ -0.65
SUB1P54000 NAR1YNL240C 1476 nt10.95□□□□□ -0.66
SUB1P54000 DIC1YLR348C 897 nt10.95□□□□□ -0.66
SUB1P54000 SFP1YLR403W 2052 nt10.95□□□□□ -0.66
SUB1P54000 YAT1YAR035W 2064 nt10.93□□□□□ -0.66
SUB1P54000 YDL086C-AYDL086C-A 435 nt10.93□□□□□ -0.66
SUB1P54000 YKR005CYKR005C 1578 nt10.92□□□□□ -0.66
SUB1P54000 tM(CAU)CtM(CAU)C 72 nt10.92□□□□□ -0.66
SUB1P54000 IMT4tM(CAU)E 72 nt10.92□□□□□ -0.66
SUB1P54000 IMT3tM(CAU)J3 72 nt10.92□□□□□ -0.66
SUB1P54000 IMT1tM(CAU)O1 72 nt10.92□□□□□ -0.66
SUB1P54000 IMT2tM(CAU)P 72 nt10.92□□□□□ -0.66
SUB1P54000 BNA2YJR078W 1362 nt10.9□□□□□ -0.66
SUB1P54000 BMT6YLR063W 1098 nt10.9□□□□□ -0.66
SUB1P54000 AGP1YCL025C 1902 nt10.9□□□□□ -0.67
SUB1P54000 BIO5YNR056C 1686 nt10.89□□□□□ -0.67
SUB1P54000 MET2YNL277W 1461 nt10.89□□□□□ -0.67
SUB1P54000 SNF1YDR477W 1902 nt10.89□□□□□ -0.67
SUB1P54000 ANP1YEL036C 1503 nt10.89□□□□□ -0.67
SUB1P54000 YDR306CYDR306C 1437 nt10.88□□□□□ -0.67
SUB1P54000 WSC2YNL283C 1512 nt10.86□□□□□ -0.67
SUB1P54000 DUS1YML080W 1272 nt10.86□□□□□ -0.67
SUB1P54000 MIC12YBR262C 321 nt10.84□□□□□ -0.67
SUB1P54000 YCL074WYCL074W 927 nt10.81□□□□□ -0.68
SUB1P54000 YGR259CYGR259C 441 nt10.81□□□□□ -0.68
SUB1P54000 YDR524C-BYDR524C-B 201 nt10.8□□□□□ -0.68
SUB1P54000 STB1YNL309W 1263 nt10.8□□□□□ -0.68
SUB1P54000 FEN2YCR028C 1539 nt10.79□□□□□ -0.68
SUB1P54000 HHO1YPL127C 777 nt10.78□□□□□ -0.68
SUB1P54000 AQY1YPR192W 918 nt10.78□□□□□ -0.68
SUB1P54000 HSL7YBR133C 2484 nt10.78□□□□□ -0.68
SUB1P54000 RDN25-1RDN25-1 3396 nt10.77□□□□□ -0.68
SUB1P54000 RDN25-2RDN25-2 3396 nt10.77□□□□□ -0.68
SUB1P54000 PBP1YGR178C 2169 nt10.76□□□□□ -0.69
SUB1P54000 SPC25YER018C 666 nt10.75□□□□□ -0.69
SUB1P54000 PTH1YHR189W 573 nt10.74□□□□□ -0.69
SUB1P54000 IRC24YIR036C 792 nt10.73□□□□□ -0.69
SUB1P54000 GTB1YDR221W 2109 nt10.72□□□□□ -0.69
SUB1P54000 HEL2YDR266C 1920 nt10.72□□□□□ -0.69
SUB1P54000 YIR016WYIR016W 798 nt10.71□□□□□ -0.69
SUB1P54000 CYT2YKL087C 675 nt10.71□□□□□ -0.69
SUB1P54000 GPI16YHR188C 1833 nt10.7□□□□□ -0.7
SUB1P54000 VPS60YDR486C 690 nt10.69□□□□□ -0.7
SUB1P54000 Q0010Q0010 387 nt10.69□□□□□ -0.7
SUB1P54000 RDN18-1RDN18-1 1800 nt10.68□□□□□ -0.7
SUB1P54000 RDN18-2RDN18-2 1800 nt10.68□□□□□ -0.7
SUB1P54000 YLR179CYLR179C 606 nt10.68□□□□□ -0.7
SUB1P54000 TIM23YNR017W 669 nt10.68□□□□□ -0.7
SUB1P54000 XDJ1YLR090W 1380 nt10.67□□□□□ -0.7
SUB1P54000 DUT1YBR252W 444 nt10.67□□□□□ -0.7
SUB1P54000 STR3YGL184C 1398 nt10.65□□□□□ -0.71
SUB1P54000 ALG3YBL082C 1377 nt10.65□□□□□ -0.71
SUB1P54000 CCT4YDL143W 1587 nt10.63□□□□□ -0.71
SUB1P54000 TOK1YJL093C 2076 nt10.62□□□□□ -0.71
SUB1P54000 YLR235CYLR235C 399 nt10.61□□□□□ -0.71
SUB1P54000 GAL2YLR081W 1725 nt10.61□□□□□ -0.71
SUB1P54000 YGR201CYGR201C 678 nt10.6□□□□□ -0.71
SUB1P54000 SPP1YPL138C 1062 nt10.6□□□□□ -0.71
SUB1P54000 PUS7YOR243C 2031 nt10.6□□□□□ -0.71
SUB1P54000 HMG2YLR450W 3138 nt10.58□□□□□ -0.72
SUB1P54000 GNP1YDR508C 1992 nt10.58□□□□□ -0.72
SUB1P54000 CMP2YML057W 1815 nt10.58□□□□□ -0.72
SUB1P54000 AQY2YLL052C 450 nt10.57□□□□□ -0.72
SUB1P54000 SWC5YBR231C 912 nt10.57□□□□□ -0.72
SUB1P54000 AHT1YHR093W 549 nt10.56□□□□□ -0.72
SUB1P54000 AVT6YER119C 1347 nt10.51□□□□□ -0.73
SUB1P54000 GOR1YNL274C 1053 nt10.49□□□□□ -0.73
SUB1P54000 TPO4YOR273C 1980 nt10.48□□□□□ -0.73
SUB1P54000 GDH3YAL062W 1374 nt10.46□□□□□ -0.74
SUB1P54000 RTN2YDL204W 1182 nt10.45□□□□□ -0.74
SUB1P54000 YKL030WYKL030W 606 nt10.45□□□□□ -0.74
SUB1P54000 YPR064WYPR064W 420 nt10.45□□□□□ -0.74
SUB1P54000 URA8YJR103W 1737 nt10.42□□□□□ -0.74
SUB1P54000 YJR154WYJR154W 1041 nt10.42□□□□□ -0.74
SUB1P54000 TAD3YLR316C 969 nt10.38□□□□□ -0.75
SUB1P54000 FRA1YLL029W 2250 nt10.38□□□□□ -0.75
SUB1P54000 NDI1YML120C 1542 nt10.35□□□□□ -0.75
SUB1P54000 SHM2YLR058C 1410 nt10.33□□□□□ -0.76
SUB1P54000 UGA4YDL210W 1716 nt10.33□□□□□ -0.76
SUB1P54000 PLB1YMR008C 1995 nt10.3□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms