Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 NAT4YMR069W 858 nt12.99□□□□□ -0.33
RPT4P53549 STB1YNL309W 1263 nt12.98□□□□□ -0.33
RPT4P53549 SPC25YER018C 666 nt12.97□□□□□ -0.33
RPT4P53549 CCT4YDL143W 1587 nt12.96□□□□□ -0.33
RPT4P53549 ATF2YGR177C 1608 nt12.94□□□□□ -0.34
RPT4P53549 YDR524C-BYDR524C-B 201 nt12.92□□□□□ -0.34
RPT4P53549 GLK1YCL040W 1503 nt12.9□□□□□ -0.34
RPT4P53549 MIR1YJR077C 936 nt12.89□□□□□ -0.35
RPT4P53549 MSF1YPR047W 1410 nt12.88□□□□□ -0.35
RPT4P53549 GPI16YHR188C 1833 nt12.88□□□□□ -0.35
RPT4P53549 VPS60YDR486C 690 nt12.87□□□□□ -0.35
RPT4P53549 DDR2YOL052C-A 186 nt12.87□□□□□ -0.35
RPT4P53549 ALG3YBL082C 1377 nt12.85□□□□□ -0.35
RPT4P53549 ERF2YLR246W 1080 nt12.85□□□□□ -0.35
RPT4P53549 SWC5YBR231C 912 nt12.85□□□□□ -0.35
RPT4P53549 THI74YDR438W 1113 nt12.84□□□□□ -0.35
RPT4P53549 YFL067WYFL067W 528 nt12.84□□□□□ -0.35
RPT4P53549 CRR1YLR213C 1269 nt12.82□□□□□ -0.36
RPT4P53549 VPS75YNL246W 795 nt12.82□□□□□ -0.36
RPT4P53549 YDL086C-AYDL086C-A 435 nt12.81□□□□□ -0.36
RPT4P53549 FEN2YCR028C 1539 nt12.78□□□□□ -0.36
RPT4P53549 ANP1YEL036C 1503 nt12.78□□□□□ -0.36
RPT4P53549 BDF1YLR399C 2061 nt12.76□□□□□ -0.37
RPT4P53549 SEC11YIR022W 504 nt12.76□□□□□ -0.37
RPT4P53549 SPT8YLR055C 1809 nt12.76□□□□□ -0.37
RPT4P53549 YMR244WYMR244W 1068 nt12.72□□□□□ -0.37
RPT4P53549 SNG1YGR197C 1644 nt12.72□□□□□ -0.37
RPT4P53549 NCP1YHR042W 2076 nt12.71□□□□□ -0.38
RPT4P53549 DAT1YML113W 747 nt12.7□□□□□ -0.38
RPT4P53549 MIC10YCL057C-A 294 nt12.69□□□□□ -0.38
RPT4P53549 LYS4YDR234W 2082 nt12.66□□□□□ -0.38
RPT4P53549 YIR016WYIR016W 798 nt12.66□□□□□ -0.38
RPT4P53549 HEM12YDR047W 1089 nt12.65□□□□□ -0.38
RPT4P53549 PCH2YBR186W 1695 nt12.64□□□□□ -0.39
RPT4P53549 TAT1YBR069C 1860 nt12.61□□□□□ -0.39
RPT4P53549 YGL034CYGL034C 366 nt12.6□□□□□ -0.39
RPT4P53549 PAU7YAR020C 168 nt12.6□□□□□ -0.39
RPT4P53549 UBA4YHR111W 1323 nt12.6□□□□□ -0.39
RPT4P53549 TIM17YJL143W 477 nt12.58□□□□□ -0.4
RPT4P53549 SHB17YKR043C 816 nt12.57□□□□□ -0.4
RPT4P53549 GLR1YPL091W 1452 nt12.57□□□□□ -0.4
RPT4P53549 GUT2YIL155C 1950 nt12.56□□□□□ -0.4
RPT4P53549 SHM2YLR058C 1410 nt12.54□□□□□ -0.4
RPT4P53549 YDR010CYDR010C 333 nt12.5□□□□□ -0.41
RPT4P53549 YSR3YKR053C 1215 nt12.49□□□□□ -0.41
RPT4P53549 XYL2YLR070C 1071 nt12.48□□□□□ -0.41
RPT4P53549 XDJ1YLR090W 1380 nt12.47□□□□□ -0.41
RPT4P53549 BOP3YNL042W 1191 nt12.47□□□□□ -0.41
RPT4P53549 RBG2YGR173W 1107 nt12.46□□□□□ -0.41
RPT4P53549 NIT1YIL164C 600 nt12.46□□□□□ -0.41
RPT4P53549 NDI1YML120C 1542 nt12.46□□□□□ -0.42
RPT4P53549 SGT2YOR007C 1041 nt12.45□□□□□ -0.42
RPT4P53549 PIB2YGL023C 1908 nt12.45□□□□□ -0.42
RPT4P53549 RTF1YGL244W 1677 nt12.44□□□□□ -0.42
RPT4P53549 RBG1YAL036C 1110 nt12.43□□□□□ -0.42
RPT4P53549 YHR056W-AYHR056W-A 435 nt12.41□□□□□ -0.42
RPT4P53549 MIC12YBR262C 321 nt12.41□□□□□ -0.42
RPT4P53549 RET2YFR051C 1641 nt12.37□□□□□ -0.43
RPT4P53549 BNA2YJR078W 1362 nt12.37□□□□□ -0.43
RPT4P53549 GDH3YAL062W 1374 nt12.37□□□□□ -0.43
RPT4P53549 PHO89YBR296C 1725 nt12.36□□□□□ -0.43
RPT4P53549 AIM45YPR004C 1035 nt12.31□□□□□ -0.44
RPT4P53549 YCR087WYCR087W 516 nt12.29□□□□□ -0.44
RPT4P53549 RAX1YOR301W 1308 nt12.29□□□□□ -0.44
RPT4P53549 PTK1YKL198C 1989 nt12.28□□□□□ -0.44
RPT4P53549 YGR201CYGR201C 678 nt12.26□□□□□ -0.45
RPT4P53549 HHO1YPL127C 777 nt12.26□□□□□ -0.45
RPT4P53549 COQ2YNR041C 1119 nt12.22□□□□□ -0.45
RPT4P53549 YMR226CYMR226C 804 nt12.21□□□□□ -0.45
RPT4P53549 AVT6YER119C 1347 nt12.2□□□□□ -0.46
RPT4P53549 SFA1YDL168W 1161 nt12.17□□□□□ -0.46
RPT4P53549 MRP20YDR405W 792 nt12.17□□□□□ -0.46
RPT4P53549 SAM1YLR180W 1149 nt12.13□□□□□ -0.47
RPT4P53549 DUT1YBR252W 444 nt12.13□□□□□ -0.47
RPT4P53549 AGP1YCL025C 1902 nt12.09□□□□□ -0.47
RPT4P53549 GOR1YNL274C 1053 nt12.09□□□□□ -0.47
RPT4P53549 YFL054CYFL054C 1941 nt12.08□□□□□ -0.48
RPT4P53549 YCR102CYCR102C 1107 nt12.08□□□□□ -0.48
RPT4P53549 YHL019W-AYHL019W-A 594 nt12.07□□□□□ -0.48
RPT4P53549 YLR111WYLR111W 333 nt12.05□□□□□ -0.48
RPT4P53549 CCA1YER168C 1641 nt12.02□□□□□ -0.49
RPT4P53549 RPL4BYDR012W 1089 nt12.01□□□□□ -0.49
RPT4P53549 RAD51YER095W 1203 nt12.01□□□□□ -0.49
RPT4P53549 SHH4YLR164W 507 nt12.01□□□□□ -0.49
RPT4P53549 RPL4AYBR031W 1089 nt12.01□□□□□ -0.49
RPT4P53549 RPS14BYJL191W 417 nt11.99□□□□□ -0.49
RPT4P53549 CAB5YDR196C 726 nt11.96□□□□□ -0.49
RPT4P53549 NBP35YGL091C 987 nt11.95□□□□□ -0.5
RPT4P53549 Q0182Q0182 405 nt11.95□□□□□ -0.5
RPT4P53549 SDH5YOL071W 489 nt11.95□□□□□ -0.5
RPT4P53549 YLR437C-AYLR437C-A 228 nt11.93□□□□□ -0.5
RPT4P53549 TIR3YIL011W 810 nt11.92□□□□□ -0.5
RPT4P53549 RAD23YEL037C 1197 nt11.91□□□□□ -0.5
RPT4P53549 CLB6YGR109C 1143 nt11.91□□□□□ -0.5
RPT4P53549 TOM6YOR045W 186 nt11.91□□□□□ -0.5
RPT4P53549 UTH1YKR042W 1098 nt11.88□□□□□ -0.51
RPT4P53549 SWE1YJL187C 2460 nt11.87□□□□□ -0.51
RPT4P53549 PEX2YJL210W 816 nt11.86□□□□□ -0.51
RPT4P53549 HIP1YGR191W 1812 nt11.86□□□□□ -0.51
RPT4P53549 POM34YLR018C 900 nt11.85□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 6.8 ms