Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 NAR1YNL240C 1476 nt8.6□□□□□ -1.03
TDA4P47153 PTH1YHR189W 573 nt8.6□□□□□ -1.03
TDA4P47153 DIC1YLR348C 897 nt8.6□□□□□ -1.03
TDA4P47153 CCA1YER168C 1641 nt8.59□□□□□ -1.03
TDA4P47153 RAX1YOR301W 1308 nt8.56□□□□□ -1.04
TDA4P47153 MRPL8YJL063C 717 nt8.56□□□□□ -1.04
TDA4P47153 YKL030WYKL030W 606 nt8.56□□□□□ -1.04
TDA4P47153 RPM1RPM1 483 nt8.55□□□□□ -1.04
TDA4P47153 RTG1YOL067C 534 nt8.55□□□□□ -1.04
TDA4P47153 HEM12YDR047W 1089 nt8.54□□□□□ -1.04
TDA4P47153 YLL053CYLL053C 459 nt8.54□□□□□ -1.04
TDA4P47153 TIM23YNR017W 669 nt8.53□□□□□ -1.04
TDA4P47153 BMT6YLR063W 1098 nt8.52□□□□□ -1.05
TDA4P47153 ADO1YJR105W 1023 nt8.51□□□□□ -1.05
TDA4P47153 MIC10YCL057C-A 294 nt8.51□□□□□ -1.05
TDA4P47153 BIO5YNR056C 1686 nt8.5□□□□□ -1.05
TDA4P47153 PBP1YGR178C 2169 nt8.49□□□□□ -1.05
TDA4P47153 YKR005CYKR005C 1578 nt8.49□□□□□ -1.05
TDA4P47153 FTR1YER145C 1215 nt8.49□□□□□ -1.05
TDA4P47153 ATF2YGR177C 1608 nt8.49□□□□□ -1.05
TDA4P47153 SNG1YGR197C 1644 nt8.48□□□□□ -1.05
TDA4P47153 YLR179CYLR179C 606 nt8.48□□□□□ -1.05
TDA4P47153 AQY1YPR192W 918 nt8.48□□□□□ -1.05
TDA4P47153 SNF1YDR477W 1902 nt8.48□□□□□ -1.05
TDA4P47153 YFL067WYFL067W 528 nt8.47□□□□□ -1.05
TDA4P47153 WSC2YNL283C 1512 nt8.46□□□□□ -1.05
TDA4P47153 HUA1YGR268C 597 nt8.46□□□□□ -1.06
TDA4P47153 CYT2YKL087C 675 nt8.46□□□□□ -1.06
TDA4P47153 GAL1YBR020W 1587 nt8.45□□□□□ -1.06
TDA4P47153 TRM5YHR070W 1500 nt8.44□□□□□ -1.06
TDA4P47153 DDR2YOL052C-A 186 nt8.42□□□□□ -1.06
TDA4P47153 YPR064WYPR064W 420 nt8.42□□□□□ -1.06
TDA4P47153 IRC24YIR036C 792 nt8.41□□□□□ -1.06
TDA4P47153 AHT1YHR093W 549 nt8.39□□□□□ -1.07
TDA4P47153 YCL074WYCL074W 927 nt8.38□□□□□ -1.07
TDA4P47153 YGR259CYGR259C 441 nt8.38□□□□□ -1.07
TDA4P47153 YDL086C-AYDL086C-A 435 nt8.37□□□□□ -1.07
TDA4P47153 STB1YNL309W 1263 nt8.37□□□□□ -1.07
TDA4P47153 MIC12YBR262C 321 nt8.36□□□□□ -1.07
TDA4P47153 YDR524C-BYDR524C-B 201 nt8.35□□□□□ -1.07
TDA4P47153 SPC25YER018C 666 nt8.35□□□□□ -1.07
TDA4P47153 TAD3YLR316C 969 nt8.35□□□□□ -1.07
TDA4P47153 GPI16YHR188C 1833 nt8.35□□□□□ -1.07
TDA4P47153 BNA2YJR078W 1362 nt8.35□□□□□ -1.07
TDA4P47153 AGP1YCL025C 1902 nt8.35□□□□□ -1.07
TDA4P47153 ANP1YEL036C 1503 nt8.34□□□□□ -1.07
TDA4P47153 tL(GAG)GtL(GAG)G 82 nt8.33□□□□□ -1.08
TDA4P47153 CMP2YML057W 1815 nt8.32□□□□□ -1.08
TDA4P47153 CCT4YDL143W 1587 nt8.31□□□□□ -1.08
TDA4P47153 DUS1YML080W 1272 nt8.3□□□□□ -1.08
TDA4P47153 FEN2YCR028C 1539 nt8.29□□□□□ -1.08
TDA4P47153 SWC5YBR231C 912 nt8.28□□□□□ -1.08
TDA4P47153 HSL7YBR133C 2484 nt8.27□□□□□ -1.09
TDA4P47153 VPS60YDR486C 690 nt8.26□□□□□ -1.09
TDA4P47153 HHO1YPL127C 777 nt8.23□□□□□ -1.09
TDA4P47153 YLR415CYLR415C 339 nt8.22□□□□□ -1.09
TDA4P47153 YIR016WYIR016W 798 nt8.21□□□□□ -1.1
TDA4P47153 YAT1YAR035W 2064 nt8.2□□□□□ -1.1
TDA4P47153 NDI1YML120C 1542 nt8.2□□□□□ -1.1
TDA4P47153 BDH1YAL060W 1149 nt8.2□□□□□ -1.1
TDA4P47153 ALG3YBL082C 1377 nt8.2□□□□□ -1.1
TDA4P47153 RDN18-1RDN18-1 1800 nt8.19□□□□□ -1.1
TDA4P47153 RDN18-2RDN18-2 1800 nt8.19□□□□□ -1.1
TDA4P47153 XDJ1YLR090W 1380 nt8.19□□□□□ -1.1
TDA4P47153 YGR201CYGR201C 678 nt8.18□□□□□ -1.1
TDA4P47153 STR3YGL184C 1398 nt8.18□□□□□ -1.1
TDA4P47153 RDN25-1RDN25-1 3396 nt8.17□□□□□ -1.1
TDA4P47153 RDN25-2RDN25-2 3396 nt8.17□□□□□ -1.1
TDA4P47153 YDR094WYDR094W 336 nt8.16□□□□□ -1.1
TDA4P47153 YSP3YOR003W 1437 nt8.14□□□□□ -1.11
TDA4P47153 YFR018CYFR018C 1092 nt8.13□□□□□ -1.11
TDA4P47153 RTN2YDL204W 1182 nt8.11□□□□□ -1.11
TDA4P47153 PEX25YPL112C 1185 nt8.11□□□□□ -1.11
TDA4P47153 YNL115CYNL115C 1935 nt8.09□□□□□ -1.11
TDA4P47153 SPT20YOL148C 1815 nt8.09□□□□□ -1.11
TDA4P47153 UBX6YJL048C 1191 nt8.08□□□□□ -1.12
TDA4P47153 TIM17YJL143W 477 nt8.08□□□□□ -1.12
TDA4P47153 DUT1YBR252W 444 nt8.07□□□□□ -1.12
TDA4P47153 GDH3YAL062W 1374 nt8.06□□□□□ -1.12
TDA4P47153 RRT5YFR032C 870 nt8.05□□□□□ -1.12
TDA4P47153 YFL066CYFL066C 1179 nt8.04□□□□□ -1.12
TDA4P47153 AQY2YLL052C 450 nt8.04□□□□□ -1.12
TDA4P47153 VPS75YNL246W 795 nt8.03□□□□□ -1.12
TDA4P47153 SHM2YLR058C 1410 nt8.03□□□□□ -1.12
TDA4P47153 RPC82YPR190C 1965 nt8.01□□□□□ -1.13
TDA4P47153 PRE6YOL038W 765 nt8.01□□□□□ -1.13
TDA4P47153 INA1YLR413W 2028 nt8□□□□□ -1.13
TDA4P47153 GOR1YNL274C 1053 nt8□□□□□ -1.13
TDA4P47153 AVT6YER119C 1347 nt8□□□□□ -1.13
TDA4P47153 PAU16YKL224C 372 nt7.98□□□□□ -1.13
TDA4P47153 HEL2YDR266C 1920 nt7.97□□□□□ -1.13
TDA4P47153 HIF1YLL022C 1158 nt7.95□□□□□ -1.14
TDA4P47153 PAU7YAR020C 168 nt7.94□□□□□ -1.14
TDA4P47153 NIT1YIL164C 600 nt7.93□□□□□ -1.14
TDA4P47153 SGT2YOR007C 1041 nt7.93□□□□□ -1.14
TDA4P47153 ALD4YOR374W 1560 nt7.93□□□□□ -1.14
TDA4P47153 DAT1YML113W 747 nt7.92□□□□□ -1.14
TDA4P47153 PLB1YMR008C 1995 nt7.9□□□□□ -1.14
TDA4P47153 ARP6YLR085C 1317 nt7.89□□□□□ -1.15
TDA4P47153 YGL114WYGL114W 2178 nt7.88□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms