Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 RTF1YGL244W 1677 nt12.16□□□□□ -0.46
VPS53P47061 YLL053CYLL053C 459 nt12.15□□□□□ -0.46
VPS53P47061 SIM1YIL123W 1431 nt12.14□□□□□ -0.47
VPS53P47061 YFL066CYFL066C 1179 nt12.14□□□□□ -0.47
VPS53P47061 FTR1YER145C 1215 nt12.11□□□□□ -0.47
VPS53P47061 GLK1YCL040W 1503 nt12.1□□□□□ -0.47
VPS53P47061 YLR415CYLR415C 339 nt12.09□□□□□ -0.47
VPS53P47061 YSP3YOR003W 1437 nt12.08□□□□□ -0.48
VPS53P47061 BDH1YAL060W 1149 nt12.07□□□□□ -0.48
VPS53P47061 GAL1YBR020W 1587 nt12.06□□□□□ -0.48
VPS53P47061 YNL115CYNL115C 1935 nt12.05□□□□□ -0.48
VPS53P47061 BOP3YNL042W 1191 nt12.02□□□□□ -0.49
VPS53P47061 PTK1YKL198C 1989 nt12.01□□□□□ -0.49
VPS53P47061 STB1YNL309W 1263 nt12.01□□□□□ -0.49
VPS53P47061 MSF1YPR047W 1410 nt12.01□□□□□ -0.49
VPS53P47061 TRM5YHR070W 1500 nt12.01□□□□□ -0.49
VPS53P47061 SPC25YER018C 666 nt12□□□□□ -0.49
VPS53P47061 CCT4YDL143W 1587 nt11.99□□□□□ -0.49
VPS53P47061 GPI16YHR188C 1833 nt11.97□□□□□ -0.49
VPS53P47061 ERF2YLR246W 1080 nt11.97□□□□□ -0.49
VPS53P47061 THI74YDR438W 1113 nt11.96□□□□□ -0.49
VPS53P47061 YDR524C-BYDR524C-B 201 nt11.95□□□□□ -0.5
VPS53P47061 VPS75YNL246W 795 nt11.95□□□□□ -0.5
VPS53P47061 ATF2YGR177C 1608 nt11.95□□□□□ -0.5
VPS53P47061 YFL067WYFL067W 528 nt11.94□□□□□ -0.5
VPS53P47061 DDR2YOL052C-A 186 nt11.94□□□□□ -0.5
VPS53P47061 SWC5YBR231C 912 nt11.94□□□□□ -0.5
VPS53P47061 NCP1YHR042W 2076 nt11.93□□□□□ -0.5
VPS53P47061 MIR1YJR077C 936 nt11.93□□□□□ -0.5
VPS53P47061 CRR1YLR213C 1269 nt11.91□□□□□ -0.5
VPS53P47061 VPS60YDR486C 690 nt11.87□□□□□ -0.51
VPS53P47061 YDL086C-AYDL086C-A 435 nt11.86□□□□□ -0.51
VPS53P47061 BOR1YNL275W 1731 nt11.83□□□□□ -0.52
VPS53P47061 ANP1YEL036C 1503 nt11.82□□□□□ -0.52
VPS53P47061 SPT8YLR055C 1809 nt11.82□□□□□ -0.52
VPS53P47061 YMR244WYMR244W 1068 nt11.82□□□□□ -0.52
VPS53P47061 LYS4YDR234W 2082 nt11.82□□□□□ -0.52
VPS53P47061 FEN2YCR028C 1539 nt11.81□□□□□ -0.52
VPS53P47061 PAU7YAR020C 168 nt11.81□□□□□ -0.52
VPS53P47061 UME6YDR207C 2511 nt11.81□□□□□ -0.52
VPS53P47061 SNG1YGR197C 1644 nt11.79□□□□□ -0.52
VPS53P47061 ALG3YBL082C 1377 nt11.79□□□□□ -0.52
VPS53P47061 GLR1YPL091W 1452 nt11.77□□□□□ -0.52
VPS53P47061 HEM12YDR047W 1089 nt11.77□□□□□ -0.53
VPS53P47061 DAT1YML113W 747 nt11.77□□□□□ -0.53
VPS53P47061 MIC10YCL057C-A 294 nt11.74□□□□□ -0.53
VPS53P47061 YFL054CYFL054C 1941 nt11.73□□□□□ -0.53
VPS53P47061 TIM17YJL143W 477 nt11.73□□□□□ -0.53
VPS53P47061 YGL034CYGL034C 366 nt11.72□□□□□ -0.53
VPS53P47061 YJL225CYJL225C 5277 nt11.69□□□□□ -0.54
VPS53P47061 UBA4YHR111W 1323 nt11.69□□□□□ -0.54
VPS53P47061 YIR016WYIR016W 798 nt11.69□□□□□ -0.54
VPS53P47061 YSR3YKR053C 1215 nt11.65□□□□□ -0.54
VPS53P47061 RBG2YGR173W 1107 nt11.63□□□□□ -0.55
VPS53P47061 SHB17YKR043C 816 nt11.63□□□□□ -0.55
VPS53P47061 NDI1YML120C 1542 nt11.62□□□□□ -0.55
VPS53P47061 YHR056W-AYHR056W-A 435 nt11.6□□□□□ -0.55
VPS53P47061 YCR087WYCR087W 516 nt11.57□□□□□ -0.56
VPS53P47061 SHM2YLR058C 1410 nt11.57□□□□□ -0.56
VPS53P47061 RBG1YAL036C 1110 nt11.55□□□□□ -0.56
VPS53P47061 XYL2YLR070C 1071 nt11.54□□□□□ -0.56
VPS53P47061 MIC12YBR262C 321 nt11.54□□□□□ -0.56
VPS53P47061 BNA2YJR078W 1362 nt11.54□□□□□ -0.56
VPS53P47061 RDN37-1RDN37-1 5354 nt11.53□□□□□ -0.56
VPS53P47061 RDN37-2RDN37-2 5354 nt11.53□□□□□ -0.56
VPS53P47061 XDJ1YLR090W 1380 nt11.53□□□□□ -0.56
VPS53P47061 YMR226CYMR226C 804 nt11.51□□□□□ -0.57
VPS53P47061 YDR010CYDR010C 333 nt11.5□□□□□ -0.57
VPS53P47061 RAX1YOR301W 1308 nt11.5□□□□□ -0.57
VPS53P47061 MCH5YOR306C 1566 nt11.49□□□□□ -0.57
VPS53P47061 RET2YFR051C 1641 nt11.49□□□□□ -0.57
VPS53P47061 HSP60YLR259C 1719 nt11.49□□□□□ -0.57
VPS53P47061 SGT2YOR007C 1041 nt11.48□□□□□ -0.57
VPS53P47061 AIM45YPR004C 1035 nt11.47□□□□□ -0.57
VPS53P47061 PHO89YBR296C 1725 nt11.46□□□□□ -0.57
VPS53P47061 NIT1YIL164C 600 nt11.45□□□□□ -0.58
VPS53P47061 GDH3YAL062W 1374 nt11.44□□□□□ -0.58
VPS53P47061 SWE1YJL187C 2460 nt11.44□□□□□ -0.58
VPS53P47061 YGR201CYGR201C 678 nt11.42□□□□□ -0.58
VPS53P47061 NME1NME1 340 nt11.42□□□□□ -0.58
VPS53P47061 ALG12YNR030W 1656 nt11.4□□□□□ -0.58
VPS53P47061 HHO1YPL127C 777 nt11.4□□□□□ -0.58
VPS53P47061 MRP20YDR405W 792 nt11.38□□□□□ -0.59
VPS53P47061 SAM1YLR180W 1149 nt11.35□□□□□ -0.59
VPS53P47061 YLR111WYLR111W 333 nt11.32□□□□□ -0.6
VPS53P47061 AVT6YER119C 1347 nt11.3□□□□□ -0.6
VPS53P47061 COQ2YNR041C 1119 nt11.28□□□□□ -0.6
VPS53P47061 GOR1YNL274C 1053 nt11.25□□□□□ -0.61
VPS53P47061 CCA1YER168C 1641 nt11.24□□□□□ -0.61
VPS53P47061 AGP1YCL025C 1902 nt11.23□□□□□ -0.61
VPS53P47061 YCR102CYCR102C 1107 nt11.23□□□□□ -0.61
VPS53P47061 RPL4BYDR012W 1089 nt11.22□□□□□ -0.61
VPS53P47061 YGR139WYGR139W 339 nt11.22□□□□□ -0.61
VPS53P47061 RPL4AYBR031W 1089 nt11.22□□□□□ -0.61
VPS53P47061 CLB6YGR109C 1143 nt11.2□□□□□ -0.62
VPS53P47061 SFA1YDL168W 1161 nt11.18□□□□□ -0.62
VPS53P47061 SDH5YOL071W 489 nt11.18□□□□□ -0.62
VPS53P47061 DUT1YBR252W 444 nt11.18□□□□□ -0.62
VPS53P47061 YHL019W-AYHL019W-A 594 nt11.16□□□□□ -0.62
VPS53P47061 FUR4YBR021W 1902 nt11.15□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms