Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.19■□□□□ 0.98
Hist1h1aP43275 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h1aP43275 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h1aP43275 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h1aP43275 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h1aP43275 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hist1h1aP43275 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h1aP43275 Gm25262-201ENSMUST00000174934 133 ntBASIC21.13■□□□□ 0.97
Hist1h1aP43275 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.13■□□□□ 0.97
Hist1h1aP43275 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h1aP43275 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h1aP43275 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Hist1h1aP43275 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
Hist1h1aP43275 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h1aP43275 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h1aP43275 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.1■□□□□ 0.97
Hist1h1aP43275 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h1aP43275 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h1aP43275 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h1aP43275 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hist1h1aP43275 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h1aP43275 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h1aP43275 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h1aP43275 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h1aP43275 Mipep-204ENSMUST00000225043 1548 ntBASIC21.05■□□□□ 0.96
Hist1h1aP43275 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hist1h1aP43275 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.03■□□□□ 0.96
Hist1h1aP43275 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.01■□□□□ 0.95
Hist1h1aP43275 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h1aP43275 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h1aP43275 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hist1h1aP43275 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h1aP43275 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h1aP43275 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1aP43275 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1aP43275 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h1aP43275 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h1aP43275 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h1aP43275 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.95■□□□□ 0.94
Hist1h1aP43275 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h1aP43275 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h1aP43275 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.93■□□□□ 0.94
Hist1h1aP43275 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h1aP43275 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h1aP43275 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hist1h1aP43275 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hist1h1aP43275 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hist1h1aP43275 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hist1h1aP43275 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.85■□□□□ 0.93
Hist1h1aP43275 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hist1h1aP43275 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h1aP43275 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h1aP43275 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hist1h1aP43275 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.83■□□□□ 0.93
Hist1h1aP43275 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hist1h1aP43275 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hist1h1aP43275 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hist1h1aP43275 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hist1h1aP43275 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hist1h1aP43275 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hist1h1aP43275 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hist1h1aP43275 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hist1h1aP43275 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hist1h1aP43275 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hist1h1aP43275 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hist1h1aP43275 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hist1h1aP43275 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hist1h1aP43275 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hist1h1aP43275 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hist1h1aP43275 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hist1h1aP43275 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h1aP43275 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.75■□□□□ 0.91
Hist1h1aP43275 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hist1h1aP43275 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hist1h1aP43275 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.73■□□□□ 0.91
Hist1h1aP43275 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hist1h1aP43275 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hist1h1aP43275 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.71■□□□□ 0.91
Hist1h1aP43275 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.71■□□□□ 0.91
Hist1h1aP43275 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Hist1h1aP43275 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Hist1h1aP43275 Gm27322-201ENSMUST00000184007 104 ntBASIC20.7■□□□□ 0.9
Hist1h1aP43275 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.7■□□□□ 0.9
Hist1h1aP43275 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hist1h1aP43275 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h1aP43275 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Hist1h1aP43275 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Hist1h1aP43275 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h1aP43275 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h1aP43275 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h1aP43275 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hist1h1aP43275 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hist1h1aP43275 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Hist1h1aP43275 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Hist1h1aP43275 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h1aP43275 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Hist1h1aP43275 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.65■□□□□ 0.9
Hist1h1aP43275 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h1aP43275 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h1aP43275 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms