RNA–Protein interactions for RNA: ENSMUST00000017530.3

Traf4-201, Transcript of TNF receptor-associated factor 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf4, Length 2,078 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4-201ENSMUST00000017530 NischQ80TM9 1593 aa50,54■■■■■ 5,68
Traf4-201ENSMUST00000017530 Gm35339A0A140LHH9 1649 aa50,01■■■■■ 5,6
Traf4-201ENSMUST00000017530 Abcc9P70170 1546 aa49,09■■■■■ 5,45
Traf4-201ENSMUST00000017530 Abcc8B2RUS7 1588 aa48,17■■■■■ 5,3
Traf4-201ENSMUST00000017530 Rhox8Q6VSS7 320 aa46,16■■■■■ 4,98
Traf4-201ENSMUST00000017530 Rtl1Q7M732 1744 aa45,19■■■■■ 4,82
Traf4-201ENSMUST00000017530 ScribQ80U72 1612 aa45,16■■■■■ 4,82
Traf4-201ENSMUST00000017530 Dcaf1Q80TR8 1506 aa44,86■■■■■ 4,77
Traf4-201ENSMUST00000017530 Rb1cc1Q9ESK9 1588 aa44,25■■■■■ 4,67
Traf4-201ENSMUST00000017530 Ccdc180J3QNE4 1664 aa44,23■■■■■ 4,67
Traf4-201ENSMUST00000017530 Kdm5dQ62240 1548 aa44,2■■■■■ 4,67
Traf4-201ENSMUST00000017530 NacadQ5SWP3 1504 aa43,91■■■■■ 4,62
Traf4-201ENSMUST00000017530 Zcchc6Q5BLK4 1491 aaKnown RBP43,78■■■■■ 4,6
Traf4-201ENSMUST00000017530 Baz1aO88379 1555 aa43,73■■■■■ 4,59
Traf4-201ENSMUST00000017530 Crybg2B7ZCC2 1516 aa43,05■■■■■ 4,48
Traf4-201ENSMUST00000017530 Sycp2Q9CUU3 1500 aa42,98■■■■■ 4,47
Traf4-201ENSMUST00000017530 Ccdc136Q3TVA9 1136 aa42,88■■■■■ 4,46
Traf4-201ENSMUST00000017530 Smarca2Q6DIC0 1577 aa42,71■■■■■ 4,43
Traf4-201ENSMUST00000017530 HrcG5E8J6 738 aa42,21■■■■■ 4,35
Traf4-201ENSMUST00000017530 BicraF8VPZ9 1578 aa42,09■■■■■ 4,33
Traf4-201ENSMUST00000017530 Trim41Q5NCC3 630 aa42,07■■■■■ 4,33
Traf4-201ENSMUST00000017530 Cecr2E9Q2Z1 1453 aa41,79■■■■■ 4,28
Traf4-201ENSMUST00000017530 Brd4Q9ESU6 1400 aaKnown RBP41,61■■■■■ 4,25
Traf4-201ENSMUST00000017530 Synj1Q8CHC4 1574 aa41,36■■■■■ 4,21
Traf4-201ENSMUST00000017530 Cep164Q5DU05 1446 aa41,17■■■■■ 4,18
Traf4-201ENSMUST00000017530 CftrP26361 1476 aa41,15■■■■■ 4,18
Traf4-201ENSMUST00000017530 Cngb1E1AZ71 1325 aa41,06■■■■■ 4,16
Traf4-201ENSMUST00000017530 Golga3P55937 1487 aa41,04■■■■■ 4,16
Traf4-201ENSMUST00000017530 Smarca4Q3TKT4 1613 aaKnown RBP41,02■■■■■ 4,16
Traf4-201ENSMUST00000017530 Cttnbp2B9EJA2 1648 aa40,97■■■■■ 4,15
Traf4-201ENSMUST00000017530 Rsf1E9PWW9 1441 aaKnown RBP40,88■■■■■ 4,13
Traf4-201ENSMUST00000017530 Chic1Q8CBW7 227 aa40,79■■■■■ 4,12
Traf4-201ENSMUST00000017530 Esf1Q3V1V3 845 aaKnown RBP40,73■■■■■ 4,11
Traf4-201ENSMUST00000017530 Ccdc88bQ4QRL3 1481 aa40,7■■■■■ 4,11
Traf4-201ENSMUST00000017530 Top2bQ64511 1612 aa40,68■■■■■ 4,1
Traf4-201ENSMUST00000017530 Ehmt2Q9Z148 1263 aaKnown RBP40,56■■■■■ 4,08
Traf4-201ENSMUST00000017530 Iqgap2Q3UQ44 1575 aa40,51■■■■■ 4,08
Traf4-201ENSMUST00000017530 Rpgrip1Q9EPQ2 1331 aa40,51■■■■■ 4,08
Traf4-201ENSMUST00000017530 Atad2bE9Q166 1460 aaKnown RBP40,41■■■■■ 4,06
Traf4-201ENSMUST00000017530 Acin1Q9JIX8 1338 aaKnown RBP40,32■■■■■ 4,05
Traf4-201ENSMUST00000017530 Pds5bQ4VA53 1446 aaKnown RBP40,29■■■■■ 4,04
Traf4-201ENSMUST00000017530 Gab3Q8BSM5 595 aa40,28■■■■■ 4,04
Traf4-201ENSMUST00000017530 Cc2d2aQ8CFW7 1633 aa40,28■■■■■ 4,04
Traf4-201ENSMUST00000017530 Fmn1Q05860 1466 aa40,06■■■■■ 4
Traf4-201ENSMUST00000017530 Top2aQ01320 1528 aaKnown RBP39,81■■■■□ 3,96
Traf4-201ENSMUST00000017530 Frmpd1A2AKB4 1549 aa39,78■■■■□ 3,96
Traf4-201ENSMUST00000017530 Wdr62Q3U3T8 1523 aa39,78■■■■□ 3,96
Traf4-201ENSMUST00000017530 Rapgef2Q8CHG7 1496 aa39,61■■■■□ 3,93
Traf4-201ENSMUST00000017530 TnnQ80Z71 1560 aa39,59■■■■□ 3,93
Traf4-201ENSMUST00000017530 Ercc6F8VPZ5 1481 aa39,55■■■■□ 3,92
Traf4-201ENSMUST00000017530 Unc13aQ4KUS2 1712 aa39,36■■■■□ 3,89
Traf4-201ENSMUST00000017530 Lamc3Q9R0B6 1581 aa39,35■■■■□ 3,89
Traf4-201ENSMUST00000017530 Cep162Q6ZQ06 1403 aa39,28■■■■□ 3,88
Traf4-201ENSMUST00000017530 Kif15Q6P9L6 1387 aa39,17■■■■□ 3,86
Traf4-201ENSMUST00000017530 Thoc2B1AZI6 1594 aaKnown RBP39,13■■■■□ 3,85
Traf4-201ENSMUST00000017530 Eif4g1Q6NZJ6 1600 aaKnown RBP39,06■■■■□ 3,84
Traf4-201ENSMUST00000017530 Npm2Q80W85 207 aa39,05■■■■□ 3,84
Traf4-201ENSMUST00000017530 Myt1lP97500 1187 aa38,97■■■■□ 3,83
Traf4-201ENSMUST00000017530 Camsap1A2AHC3 1581 aa38,96■■■■□ 3,83
Traf4-201ENSMUST00000017530 Phldb1Q6PDH0 1371 aaKnown RBP38,94■■■■□ 3,82
Traf4-201ENSMUST00000017530 PtprkP35822 1457 aa38,88■■■■□ 3,81
Traf4-201ENSMUST00000017530 Il27Q8K3I6 234 aa38,88■■■■□ 3,81
Traf4-201ENSMUST00000017530 NrkQ9R0G8 1455 aa38,83■■■■□ 3,81
Traf4-201ENSMUST00000017530 Arhgap35Q91YM2 1499 aa38,77■■■■□ 3,8
Traf4-201ENSMUST00000017530 Ccdc18Q640L5 1455 aa38,76■■■■□ 3,79
Traf4-201ENSMUST00000017530 Shroom4Q1W617 1475 aa38,73■■■■□ 3,79
Traf4-201ENSMUST00000017530 Mier1Q5UAK0 511 aa38,72■■■■□ 3,79
Traf4-201ENSMUST00000017530 Fam135aQ6NS59 1506 aa38,68■■■■□ 3,78
Traf4-201ENSMUST00000017530 Grin2bQ01097 1482 aa38,66■■■■□ 3,78
Traf4-201ENSMUST00000017530 Ubl4bQ9CQ84 188 aa38,64■■■■□ 3,78
Traf4-201ENSMUST00000017530 Cux2P70298 1426 aa38,61■■■■□ 3,77
Traf4-201ENSMUST00000017530 Clip1Q922J3 1391 aa38,56■■■■□ 3,76
Traf4-201ENSMUST00000017530 UbtfP25976 765 aaKnown RBP38,5■■■■□ 3,75
Traf4-201ENSMUST00000017530 Map3k1P53349 1493 aa38,48■■■■□ 3,75
Traf4-201ENSMUST00000017530 NefmP08553 848 aa38,4■■■■□ 3,74
Traf4-201ENSMUST00000017530 Npm1Q61937 292 aaKnown RBP38,37■■■■□ 3,73
Traf4-201ENSMUST00000017530 Mroh2bQ7M6Y6 1581 aa38,34■■■■□ 3,73
Traf4-201ENSMUST00000017530 Eea1Q8BL66 1411 aa38,29■■■■□ 3,72
Traf4-201ENSMUST00000017530 Baz1bQ9Z277 1479 aa38,27■■■■□ 3,72
Traf4-201ENSMUST00000017530 LrpprcQ6PB66 1392 aaKnown RBP38,27■■■■□ 3,72
Traf4-201ENSMUST00000017530 Plekhg3Q4VAC9 1341 aa38,24■■■■□ 3,71
Traf4-201ENSMUST00000017530 Arap1Q4LDD4 1452 aa38,24■■■■□ 3,71
Traf4-201ENSMUST00000017530 Zeb1Q64318 1117 aa38,23■■■■□ 3,71
Traf4-201ENSMUST00000017530 Efcab5A0JP43 1406 aa38,22■■■■□ 3,71
Traf4-201ENSMUST00000017530 PogzQ8BZH4 1409 aaKnown RBP38,2■■■■□ 3,71
Traf4-201ENSMUST00000017530 Pcgf6Q99NA9 353 aa38,18■■■■□ 3,7
Traf4-201ENSMUST00000017530 Setd5Q5XJV7 1441 aa38,15■■■■□ 3,7
Traf4-201ENSMUST00000017530 AqrQ8CFQ3 1481 aaKnown RBP38,14■■■■□ 3,7
Traf4-201ENSMUST00000017530 Duox2A2AQ99 1517 aa38,13■■■■□ 3,69
Traf4-201ENSMUST00000017530 Arhgef5E9Q7D5 1581 aa38,1■■■■□ 3,69
Traf4-201ENSMUST00000017530 Ankrd26Q811D2 1581 aa38,01■■■■□ 3,67
Traf4-201ENSMUST00000017530 Ap3b1Q9Z1T1 1105 aa38■■■■□ 3,67
Traf4-201ENSMUST00000017530 Erich3F6QRE9 1637 aa38■■■■□ 3,67
Traf4-201ENSMUST00000017530 Dhx29Q6PGC1 1365 aaKnown RBP37,96■■■■□ 3,67
Traf4-201ENSMUST00000017530 Carmil1Q6EDY6 1374 aa37,93■■■■□ 3,66
Traf4-201ENSMUST00000017530 Ncapd3Q6ZQK0 1506 aa37,9■■■■□ 3,66
Traf4-201ENSMUST00000017530 Samd9lQ69Z37 1561 aa37,89■■■■□ 3,66
Traf4-201ENSMUST00000017530 Supt5hO55201 1082 aaKnown RBP37,89■■■■□ 3,66
Traf4-201ENSMUST00000017530 Tiam1Q60610 1591 aa37,86■■■■□ 3,65
Traf4-201ENSMUST00000017530 Mrc2Q64449 1479 aa37,85■■■■□ 3,65
Retrieved 100 of 22,080 RNA–protein pairs in 10,9 ms