RNA–Protein interactions for RNA: ENSMUST00000017530.3

Traf4-201, Transcript of TNF receptor-associated factor 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf4, Length 2,078 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4-201ENSMUST00000017530 NischQ80TM9 1593 aa50.54■■■■■ 5.68
Traf4-201ENSMUST00000017530 Gm35339A0A140LHH9 1649 aa50.01■■■■■ 5.6
Traf4-201ENSMUST00000017530 Abcc9P70170 1546 aa49.09■■■■■ 5.45
Traf4-201ENSMUST00000017530 Abcc8B2RUS7 1588 aa48.17■■■■■ 5.3
Traf4-201ENSMUST00000017530 Rhox8Q6VSS7 320 aa46.16■■■■■ 4.98
Traf4-201ENSMUST00000017530 Rtl1Q7M732 1744 aa45.19■■■■■ 4.82
Traf4-201ENSMUST00000017530 ScribQ80U72 1612 aa45.16■■■■■ 4.82
Traf4-201ENSMUST00000017530 Dcaf1Q80TR8 1506 aa44.86■■■■■ 4.77
Traf4-201ENSMUST00000017530 Rb1cc1Q9ESK9 1588 aa44.25■■■■■ 4.67
Traf4-201ENSMUST00000017530 Ccdc180J3QNE4 1664 aa44.23■■■■■ 4.67
Traf4-201ENSMUST00000017530 Kdm5dQ62240 1548 aa44.2■■■■■ 4.67
Traf4-201ENSMUST00000017530 NacadQ5SWP3 1504 aa43.91■■■■■ 4.62
Traf4-201ENSMUST00000017530 Zcchc6Q5BLK4 1491 aaKnown RBP43.78■■■■■ 4.6
Traf4-201ENSMUST00000017530 Baz1aO88379 1555 aa43.73■■■■■ 4.59
Traf4-201ENSMUST00000017530 Crybg2B7ZCC2 1516 aa43.05■■■■■ 4.48
Traf4-201ENSMUST00000017530 Sycp2Q9CUU3 1500 aa42.98■■■■■ 4.47
Traf4-201ENSMUST00000017530 Ccdc136Q3TVA9 1136 aa42.88■■■■■ 4.46
Traf4-201ENSMUST00000017530 Smarca2Q6DIC0 1577 aa42.71■■■■■ 4.43
Traf4-201ENSMUST00000017530 HrcG5E8J6 738 aa42.21■■■■■ 4.35
Traf4-201ENSMUST00000017530 BicraF8VPZ9 1578 aa42.09■■■■■ 4.33
Traf4-201ENSMUST00000017530 Trim41Q5NCC3 630 aa42.07■■■■■ 4.33
Traf4-201ENSMUST00000017530 Cecr2E9Q2Z1 1453 aa41.79■■■■■ 4.28
Traf4-201ENSMUST00000017530 Brd4Q9ESU6 1400 aaKnown RBP41.61■■■■■ 4.25
Traf4-201ENSMUST00000017530 Synj1Q8CHC4 1574 aa41.36■■■■■ 4.21
Traf4-201ENSMUST00000017530 Cep164Q5DU05 1446 aa41.17■■■■■ 4.18
Traf4-201ENSMUST00000017530 CftrP26361 1476 aa41.15■■■■■ 4.18
Traf4-201ENSMUST00000017530 Cngb1E1AZ71 1325 aa41.06■■■■■ 4.16
Traf4-201ENSMUST00000017530 Golga3P55937 1487 aa41.04■■■■■ 4.16
Traf4-201ENSMUST00000017530 Smarca4Q3TKT4 1613 aaKnown RBP41.02■■■■■ 4.16
Traf4-201ENSMUST00000017530 Cttnbp2B9EJA2 1648 aa40.97■■■■■ 4.15
Traf4-201ENSMUST00000017530 Rsf1E9PWW9 1441 aaKnown RBP40.88■■■■■ 4.13
Traf4-201ENSMUST00000017530 Chic1Q8CBW7 227 aa40.79■■■■■ 4.12
Traf4-201ENSMUST00000017530 Esf1Q3V1V3 845 aaKnown RBP40.73■■■■■ 4.11
Traf4-201ENSMUST00000017530 Ccdc88bQ4QRL3 1481 aa40.7■■■■■ 4.11
Traf4-201ENSMUST00000017530 Top2bQ64511 1612 aa40.68■■■■■ 4.1
Traf4-201ENSMUST00000017530 Ehmt2Q9Z148 1263 aaKnown RBP40.56■■■■■ 4.08
Traf4-201ENSMUST00000017530 Iqgap2Q3UQ44 1575 aa40.51■■■■■ 4.08
Traf4-201ENSMUST00000017530 Rpgrip1Q9EPQ2 1331 aa40.51■■■■■ 4.08
Traf4-201ENSMUST00000017530 Atad2bE9Q166 1460 aaKnown RBP40.41■■■■■ 4.06
Traf4-201ENSMUST00000017530 Acin1Q9JIX8 1338 aaKnown RBP40.32■■■■■ 4.05
Traf4-201ENSMUST00000017530 Pds5bQ4VA53 1446 aaKnown RBP40.29■■■■■ 4.04
Traf4-201ENSMUST00000017530 Gab3Q8BSM5 595 aa40.28■■■■■ 4.04
Traf4-201ENSMUST00000017530 Cc2d2aQ8CFW7 1633 aa40.28■■■■■ 4.04
Traf4-201ENSMUST00000017530 Fmn1Q05860 1466 aa40.06■■■■■ 4
Traf4-201ENSMUST00000017530 Top2aQ01320 1528 aaKnown RBP39.81■■■■□ 3.96
Traf4-201ENSMUST00000017530 Frmpd1A2AKB4 1549 aa39.78■■■■□ 3.96
Traf4-201ENSMUST00000017530 Wdr62Q3U3T8 1523 aa39.78■■■■□ 3.96
Traf4-201ENSMUST00000017530 Rapgef2Q8CHG7 1496 aa39.61■■■■□ 3.93
Traf4-201ENSMUST00000017530 TnnQ80Z71 1560 aa39.59■■■■□ 3.93
Traf4-201ENSMUST00000017530 Ercc6F8VPZ5 1481 aa39.55■■■■□ 3.92
Traf4-201ENSMUST00000017530 Unc13aQ4KUS2 1712 aa39.36■■■■□ 3.89
Traf4-201ENSMUST00000017530 Lamc3Q9R0B6 1581 aa39.35■■■■□ 3.89
Traf4-201ENSMUST00000017530 Cep162Q6ZQ06 1403 aa39.28■■■■□ 3.88
Traf4-201ENSMUST00000017530 Kif15Q6P9L6 1387 aa39.17■■■■□ 3.86
Traf4-201ENSMUST00000017530 Thoc2B1AZI6 1594 aaKnown RBP39.13■■■■□ 3.85
Traf4-201ENSMUST00000017530 Eif4g1Q6NZJ6 1600 aaKnown RBP39.06■■■■□ 3.84
Traf4-201ENSMUST00000017530 Npm2Q80W85 207 aa39.05■■■■□ 3.84
Traf4-201ENSMUST00000017530 Myt1lP97500 1187 aa38.97■■■■□ 3.83
Traf4-201ENSMUST00000017530 Camsap1A2AHC3 1581 aa38.96■■■■□ 3.83
Traf4-201ENSMUST00000017530 Phldb1Q6PDH0 1371 aaKnown RBP38.94■■■■□ 3.82
Traf4-201ENSMUST00000017530 PtprkP35822 1457 aa38.88■■■■□ 3.81
Traf4-201ENSMUST00000017530 Il27Q8K3I6 234 aa38.88■■■■□ 3.81
Traf4-201ENSMUST00000017530 NrkQ9R0G8 1455 aa38.83■■■■□ 3.81
Traf4-201ENSMUST00000017530 Arhgap35Q91YM2 1499 aa38.77■■■■□ 3.8
Traf4-201ENSMUST00000017530 Ccdc18Q640L5 1455 aa38.76■■■■□ 3.79
Traf4-201ENSMUST00000017530 Shroom4Q1W617 1475 aa38.73■■■■□ 3.79
Traf4-201ENSMUST00000017530 Mier1Q5UAK0 511 aa38.72■■■■□ 3.79
Traf4-201ENSMUST00000017530 Fam135aQ6NS59 1506 aa38.68■■■■□ 3.78
Traf4-201ENSMUST00000017530 Grin2bQ01097 1482 aa38.66■■■■□ 3.78
Traf4-201ENSMUST00000017530 Ubl4bQ9CQ84 188 aa38.64■■■■□ 3.78
Traf4-201ENSMUST00000017530 Cux2P70298 1426 aa38.61■■■■□ 3.77
Traf4-201ENSMUST00000017530 Clip1Q922J3 1391 aa38.56■■■■□ 3.76
Traf4-201ENSMUST00000017530 UbtfP25976 765 aaKnown RBP38.5■■■■□ 3.75
Traf4-201ENSMUST00000017530 Map3k1P53349 1493 aa38.48■■■■□ 3.75
Traf4-201ENSMUST00000017530 NefmP08553 848 aa38.4■■■■□ 3.74
Traf4-201ENSMUST00000017530 Npm1Q61937 292 aaKnown RBP38.37■■■■□ 3.73
Traf4-201ENSMUST00000017530 Mroh2bQ7M6Y6 1581 aa38.34■■■■□ 3.73
Traf4-201ENSMUST00000017530 Eea1Q8BL66 1411 aa38.29■■■■□ 3.72
Traf4-201ENSMUST00000017530 Baz1bQ9Z277 1479 aa38.27■■■■□ 3.72
Traf4-201ENSMUST00000017530 LrpprcQ6PB66 1392 aaKnown RBP38.27■■■■□ 3.72
Traf4-201ENSMUST00000017530 Plekhg3Q4VAC9 1341 aa38.24■■■■□ 3.71
Traf4-201ENSMUST00000017530 Arap1Q4LDD4 1452 aa38.24■■■■□ 3.71
Traf4-201ENSMUST00000017530 Zeb1Q64318 1117 aa38.23■■■■□ 3.71
Traf4-201ENSMUST00000017530 Efcab5A0JP43 1406 aa38.22■■■■□ 3.71
Traf4-201ENSMUST00000017530 PogzQ8BZH4 1409 aaKnown RBP38.2■■■■□ 3.71
Traf4-201ENSMUST00000017530 Pcgf6Q99NA9 353 aa38.18■■■■□ 3.7
Traf4-201ENSMUST00000017530 Setd5Q5XJV7 1441 aa38.15■■■■□ 3.7
Traf4-201ENSMUST00000017530 AqrQ8CFQ3 1481 aaKnown RBP38.14■■■■□ 3.7
Traf4-201ENSMUST00000017530 Duox2A2AQ99 1517 aa38.13■■■■□ 3.69
Traf4-201ENSMUST00000017530 Arhgef5E9Q7D5 1581 aa38.1■■■■□ 3.69
Traf4-201ENSMUST00000017530 Ankrd26Q811D2 1581 aa38.01■■■■□ 3.67
Traf4-201ENSMUST00000017530 Ap3b1Q9Z1T1 1105 aa38■■■■□ 3.67
Traf4-201ENSMUST00000017530 Erich3F6QRE9 1637 aa38■■■■□ 3.67
Traf4-201ENSMUST00000017530 Dhx29Q6PGC1 1365 aaKnown RBP37.96■■■■□ 3.67
Traf4-201ENSMUST00000017530 Carmil1Q6EDY6 1374 aa37.93■■■■□ 3.66
Traf4-201ENSMUST00000017530 Ncapd3Q6ZQK0 1506 aa37.9■■■■□ 3.66
Traf4-201ENSMUST00000017530 Samd9lQ69Z37 1561 aa37.89■■■■□ 3.66
Traf4-201ENSMUST00000017530 Supt5hO55201 1082 aaKnown RBP37.89■■■■□ 3.66
Traf4-201ENSMUST00000017530 Tiam1Q60610 1591 aa37.86■■■■□ 3.65
Traf4-201ENSMUST00000017530 Mrc2Q64449 1479 aa37.85■■■■□ 3.65
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms