Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 YFL067WYFL067W 528 nt8.89□□□□□ -0.99
PGD1P40356 IMP2'YIL154C 1041 nt8.89□□□□□ -0.99
PGD1P40356 YIH1YCR059C 777 nt8.88□□□□□ -0.99
PGD1P40356 YLL053CYLL053C 459 nt8.87□□□□□ -0.99
PGD1P40356 RIM8YGL045W 1629 nt8.87□□□□□ -0.99
PGD1P40356 BNA2YJR078W 1362 nt8.86□□□□□ -0.99
PGD1P40356 AGP1YCL025C 1902 nt8.86□□□□□ -0.99
PGD1P40356 WHI5YOR083W 888 nt8.85□□□□□ -0.99
PGD1P40356 GBP2YCL011C 1284 nt8.85□□□□□ -0.99
PGD1P40356 INA1YLR413W 2028 nt8.85□□□□□ -0.99
PGD1P40356 IDH1YNL037C 1083 nt8.82□□□□□ -1
PGD1P40356 YOR139CYOR139C 393 nt8.82□□□□□ -1
PGD1P40356 RNQ1YCL028W 1218 nt8.8□□□□□ -1
PGD1P40356 RPC82YPR190C 1965 nt8.8□□□□□ -1
PGD1P40356 YGL114WYGL114W 2178 nt8.8□□□□□ -1
PGD1P40356 MIC12YBR262C 321 nt8.79□□□□□ -1
PGD1P40356 DDR2YOL052C-A 186 nt8.78□□□□□ -1
PGD1P40356 MET2YNL277W 1461 nt8.76□□□□□ -1.01
PGD1P40356 YDL086C-AYDL086C-A 435 nt8.75□□□□□ -1.01
PGD1P40356 FTR1YER145C 1215 nt8.75□□□□□ -1.01
PGD1P40356 SOR2YDL246C 1074 nt8.74□□□□□ -1.01
PGD1P40356 SOR1YJR159W 1074 nt8.74□□□□□ -1.01
PGD1P40356 MAE1YKL029C 2010 nt8.74□□□□□ -1.01
PGD1P40356 TRM5YHR070W 1500 nt8.72□□□□□ -1.01
PGD1P40356 HHO1YPL127C 777 nt8.72□□□□□ -1.01
PGD1P40356 RDN18-1RDN18-1 1800 nt8.72□□□□□ -1.01
PGD1P40356 RDN18-2RDN18-2 1800 nt8.72□□□□□ -1.01
PGD1P40356 GPI16YHR188C 1833 nt8.71□□□□□ -1.01
PGD1P40356 ANP1YEL036C 1503 nt8.71□□□□□ -1.01
PGD1P40356 GAL1YBR020W 1587 nt8.7□□□□□ -1.02
PGD1P40356 STR3YGL184C 1398 nt8.7□□□□□ -1.02
PGD1P40356 MUP1YGR055W 1725 nt8.69□□□□□ -1.02
PGD1P40356 YCL042WYCL042W 360 nt8.69□□□□□ -1.02
PGD1P40356 GDH3YAL062W 1374 nt8.68□□□□□ -1.02
PGD1P40356 RTN2YDL204W 1182 nt8.67□□□□□ -1.02
PGD1P40356 XDJ1YLR090W 1380 nt8.63□□□□□ -1.03
PGD1P40356 LPX1YOR084W 1164 nt8.63□□□□□ -1.03
PGD1P40356 MXR2YCL033C 507 nt8.63□□□□□ -1.03
PGD1P40356 SSN3YPL042C 1668 nt8.62□□□□□ -1.03
PGD1P40356 YDR433WYDR433W 441 nt8.6□□□□□ -1.03
PGD1P40356 YGR201CYGR201C 678 nt8.6□□□□□ -1.03
PGD1P40356 AQY2YLL052C 450 nt8.6□□□□□ -1.03
PGD1P40356 SFP1YLR403W 2052 nt8.6□□□□□ -1.03
PGD1P40356 FMP45YDL222C 930 nt8.59□□□□□ -1.03
PGD1P40356 PUS2YGL063W 1113 nt8.59□□□□□ -1.03
PGD1P40356 HIF1YLL022C 1158 nt8.59□□□□□ -1.03
PGD1P40356 YPR011CYPR011C 981 nt8.58□□□□□ -1.04
PGD1P40356 ACO2YJL200C 2370 nt8.57□□□□□ -1.04
PGD1P40356 HOL1YNR055C 1761 nt8.56□□□□□ -1.04
PGD1P40356 AQY1YPR192W 918 nt8.56□□□□□ -1.04
PGD1P40356 FEN2YCR028C 1539 nt8.55□□□□□ -1.04
PGD1P40356 ALD4YOR374W 1560 nt8.55□□□□□ -1.04
PGD1P40356 GID7YCL039W 2238 nt8.54□□□□□ -1.04
PGD1P40356 YDR524C-BYDR524C-B 201 nt8.53□□□□□ -1.04
PGD1P40356 FRD1YEL047C 1413 nt8.53□□□□□ -1.04
PGD1P40356 ERV46YAL042W 1248 nt8.52□□□□□ -1.05
PGD1P40356 DIC1YLR348C 897 nt8.52□□□□□ -1.05
PGD1P40356 YIR016WYIR016W 798 nt8.51□□□□□ -1.05
PGD1P40356 STB1YNL309W 1263 nt8.51□□□□□ -1.05
PGD1P40356 DUT1YBR252W 444 nt8.51□□□□□ -1.05
PGD1P40356 SPC25YER018C 666 nt8.49□□□□□ -1.05
PGD1P40356 tM(CAU)CtM(CAU)C 72 nt8.49□□□□□ -1.05
PGD1P40356 IMT4tM(CAU)E 72 nt8.49□□□□□ -1.05
PGD1P40356 IMT3tM(CAU)J3 72 nt8.49□□□□□ -1.05
PGD1P40356 IMT1tM(CAU)O1 72 nt8.49□□□□□ -1.05
PGD1P40356 IMT2tM(CAU)P 72 nt8.49□□□□□ -1.05
PGD1P40356 YKR040CYKR040C 504 nt8.48□□□□□ -1.05
PGD1P40356 ZRT3YKL175W 1512 nt8.46□□□□□ -1.05
PGD1P40356 FRE6YLL051C 2139 nt8.46□□□□□ -1.06
PGD1P40356 GOR1YNL274C 1053 nt8.46□□□□□ -1.06
PGD1P40356 UGA4YDL210W 1716 nt8.45□□□□□ -1.06
PGD1P40356 YMR209CYMR209C 1374 nt8.45□□□□□ -1.06
PGD1P40356 PRM5YIL117C 957 nt8.44□□□□□ -1.06
PGD1P40356 TPO4YOR273C 1980 nt8.44□□□□□ -1.06
PGD1P40356 NPP1YCR026C 2229 nt8.42□□□□□ -1.06
PGD1P40356 HMG2YLR450W 3138 nt8.41□□□□□ -1.06
PGD1P40356 AVT6YER119C 1347 nt8.41□□□□□ -1.06
PGD1P40356 YNL024CYNL024C 741 nt8.4□□□□□ -1.06
PGD1P40356 PLB1YMR008C 1995 nt8.39□□□□□ -1.07
PGD1P40356 HIS2YFR025C 1008 nt8.39□□□□□ -1.07
PGD1P40356 VPS60YDR486C 690 nt8.38□□□□□ -1.07
PGD1P40356 ILV3YJR016C 1758 nt8.38□□□□□ -1.07
PGD1P40356 YHL008CYHL008C 1884 nt8.35□□□□□ -1.07
PGD1P40356 YJL067WYJL067W 351 nt8.34□□□□□ -1.07
PGD1P40356 CCT4YDL143W 1587 nt8.33□□□□□ -1.08
PGD1P40356 ALG3YBL082C 1377 nt8.32□□□□□ -1.08
PGD1P40356 ARP6YLR085C 1317 nt8.31□□□□□ -1.08
PGD1P40356 UGP1YKL035W 1500 nt8.3□□□□□ -1.08
PGD1P40356 PSD1YNL169C 1503 nt8.3□□□□□ -1.08
PGD1P40356 SWC5YBR231C 912 nt8.3□□□□□ -1.08
PGD1P40356 COQ8YGL119W 1506 nt8.29□□□□□ -1.08
PGD1P40356 ESBP6YNL125C 2022 nt8.29□□□□□ -1.08
PGD1P40356 CYT1YOR065W 930 nt8.29□□□□□ -1.08
PGD1P40356 YOR325WYOR325W 474 nt8.28□□□□□ -1.08
PGD1P40356 BSP1YPR171W 1731 nt8.28□□□□□ -1.08
PGD1P40356 SAM35YHR083W 990 nt8.26□□□□□ -1.09
PGD1P40356 YIL100C-AYIL100C-A 339 nt8.25□□□□□ -1.09
PGD1P40356 URA8YJR103W 1737 nt8.24□□□□□ -1.09
PGD1P40356 PTH1YHR189W 573 nt8.24□□□□□ -1.09
PGD1P40356 HXK1YFR053C 1458 nt8.24□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 8.3 ms