Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 TAD3YLR316C 969 nt9.81□□□□□ -0.84
SHO1P40073 YDR094WYDR094W 336 nt9.8□□□□□ -0.84
SHO1P40073 TRM5YHR070W 1500 nt9.79□□□□□ -0.84
SHO1P40073 YFL067WYFL067W 528 nt9.79□□□□□ -0.84
SHO1P40073 UBX6YJL048C 1191 nt9.79□□□□□ -0.84
SHO1P40073 LYS4YDR234W 2082 nt9.79□□□□□ -0.84
SHO1P40073 ATF2YGR177C 1608 nt9.78□□□□□ -0.84
SHO1P40073 UME6YDR207C 2511 nt9.78□□□□□ -0.84
SHO1P40073 CRR1YLR213C 1269 nt9.78□□□□□ -0.84
SHO1P40073 SPC25YER018C 666 nt9.76□□□□□ -0.85
SHO1P40073 DDR2YOL052C-A 186 nt9.75□□□□□ -0.85
SHO1P40073 STB1YNL309W 1263 nt9.74□□□□□ -0.85
SHO1P40073 PTK1YKL198C 1989 nt9.73□□□□□ -0.85
SHO1P40073 YDL086C-AYDL086C-A 435 nt9.71□□□□□ -0.86
SHO1P40073 YDR524C-BYDR524C-B 201 nt9.7□□□□□ -0.86
SHO1P40073 GPI16YHR188C 1833 nt9.7□□□□□ -0.86
SHO1P40073 YFR018CYFR018C 1092 nt9.69□□□□□ -0.86
SHO1P40073 CCT4YDL143W 1587 nt9.68□□□□□ -0.86
SHO1P40073 ANP1YEL036C 1503 nt9.68□□□□□ -0.86
SHO1P40073 HEM12YDR047W 1089 nt9.68□□□□□ -0.86
SHO1P40073 SNG1YGR197C 1644 nt9.67□□□□□ -0.86
SHO1P40073 BDH1YAL060W 1149 nt9.65□□□□□ -0.86
SHO1P40073 FEN2YCR028C 1539 nt9.64□□□□□ -0.87
SHO1P40073 VPS60YDR486C 690 nt9.63□□□□□ -0.87
SHO1P40073 MIC10YCL057C-A 294 nt9.62□□□□□ -0.87
SHO1P40073 YLR415CYLR415C 339 nt9.61□□□□□ -0.87
SHO1P40073 YSP3YOR003W 1437 nt9.61□□□□□ -0.87
SHO1P40073 SWC5YBR231C 912 nt9.59□□□□□ -0.87
SHO1P40073 ALG3YBL082C 1377 nt9.58□□□□□ -0.88
SHO1P40073 RRT5YFR032C 870 nt9.57□□□□□ -0.88
SHO1P40073 YHR056W-AYHR056W-A 435 nt9.57□□□□□ -0.88
SHO1P40073 PEX25YPL112C 1185 nt9.57□□□□□ -0.88
SHO1P40073 YIR016WYIR016W 798 nt9.56□□□□□ -0.88
SHO1P40073 YFL054CYFL054C 1941 nt9.54□□□□□ -0.88
SHO1P40073 PRE6YOL038W 765 nt9.53□□□□□ -0.88
SHO1P40073 YFL015W-AYFL015W-A 318 nt9.52□□□□□ -0.89
SHO1P40073 YFL066CYFL066C 1179 nt9.52□□□□□ -0.89
SHO1P40073 YNL115CYNL115C 1935 nt9.51□□□□□ -0.89
SHO1P40073 PAU16YKL224C 372 nt9.51□□□□□ -0.89
SHO1P40073 RAX1YOR301W 1308 nt9.5□□□□□ -0.89
SHO1P40073 SPT8YLR055C 1809 nt9.49□□□□□ -0.89
SHO1P40073 MIC12YBR262C 321 nt9.49□□□□□ -0.89
SHO1P40073 BNA2YJR078W 1362 nt9.48□□□□□ -0.89
SHO1P40073 VPS75YNL246W 795 nt9.44□□□□□ -0.9
SHO1P40073 TIM17YJL143W 477 nt9.4□□□□□ -0.9
SHO1P40073 YGR201CYGR201C 678 nt9.38□□□□□ -0.91
SHO1P40073 XDJ1YLR090W 1380 nt9.37□□□□□ -0.91
SHO1P40073 SHM2YLR058C 1410 nt9.37□□□□□ -0.91
SHO1P40073 HHO1YPL127C 777 nt9.36□□□□□ -0.91
SHO1P40073 SWE1YJL187C 2460 nt9.35□□□□□ -0.91
SHO1P40073 MIR1YJR077C 936 nt9.32□□□□□ -0.92
SHO1P40073 GDH3YAL062W 1374 nt9.32□□□□□ -0.92
SHO1P40073 NAT4YMR069W 858 nt9.31□□□□□ -0.92
SHO1P40073 GLK1YCL040W 1503 nt9.31□□□□□ -0.92
SHO1P40073 CCA1YER168C 1641 nt9.3□□□□□ -0.92
SHO1P40073 NIT1YIL164C 600 nt9.29□□□□□ -0.92
SHO1P40073 THI74YDR438W 1113 nt9.27□□□□□ -0.93
SHO1P40073 PAU7YAR020C 168 nt9.26□□□□□ -0.93
SHO1P40073 AGP1YCL025C 1902 nt9.25□□□□□ -0.93
SHO1P40073 MSF1YPR047W 1410 nt9.25□□□□□ -0.93
SHO1P40073 SGT2YOR007C 1041 nt9.24□□□□□ -0.93
SHO1P40073 DAT1YML113W 747 nt9.23□□□□□ -0.93
SHO1P40073 AVT6YER119C 1347 nt9.23□□□□□ -0.93
SHO1P40073 GOR1YNL274C 1053 nt9.22□□□□□ -0.93
SHO1P40073 UBA4YHR111W 1323 nt9.18□□□□□ -0.94
SHO1P40073 SHB17YKR043C 816 nt9.18□□□□□ -0.94
SHO1P40073 YDR010CYDR010C 333 nt9.16□□□□□ -0.94
SHO1P40073 DUT1YBR252W 444 nt9.15□□□□□ -0.94
SHO1P40073 YCR102CYCR102C 1107 nt9.14□□□□□ -0.95
SHO1P40073 MCH5YOR306C 1566 nt9.14□□□□□ -0.95
SHO1P40073 SBA1YKL117W 651 nt9.12□□□□□ -0.95
SHO1P40073 RET2YFR051C 1641 nt9.12□□□□□ -0.95
SHO1P40073 RPM1RPM1 483 nt9.11□□□□□ -0.95
SHO1P40073 YGL034CYGL034C 366 nt9.1□□□□□ -0.95
SHO1P40073 YSR3YKR053C 1215 nt9.1□□□□□ -0.95
SHO1P40073 DUS1YML080W 1272 nt9.09□□□□□ -0.95
SHO1P40073 YCL074WYCL074W 927 nt9.08□□□□□ -0.96
SHO1P40073 YCR087WYCR087W 516 nt9.07□□□□□ -0.96
SHO1P40073 STR3YGL184C 1398 nt9.07□□□□□ -0.96
SHO1P40073 NBP35YGL091C 987 nt9.06□□□□□ -0.96
SHO1P40073 BOR1YNL275W 1731 nt9.05□□□□□ -0.96
SHO1P40073 PHO89YBR296C 1725 nt9.04□□□□□ -0.96
SHO1P40073 FUR4YBR021W 1902 nt9.03□□□□□ -0.96
SHO1P40073 XYL2YLR070C 1071 nt9.02□□□□□ -0.97
SHO1P40073 RDN18-1RDN18-1 1800 nt9.01□□□□□ -0.97
SHO1P40073 RDN18-2RDN18-2 1800 nt9.01□□□□□ -0.97
SHO1P40073 TIR3YIL011W 810 nt9□□□□□ -0.97
SHO1P40073 SFA1YDL168W 1161 nt8.99□□□□□ -0.97
SHO1P40073 AIM45YPR004C 1035 nt8.98□□□□□ -0.97
SHO1P40073 AQY2YLL052C 450 nt8.97□□□□□ -0.97
SHO1P40073 MRP20YDR405W 792 nt8.96□□□□□ -0.98
SHO1P40073 COQ2YNR041C 1119 nt8.96□□□□□ -0.98
SHO1P40073 HSP60YLR259C 1719 nt8.96□□□□□ -0.98
SHO1P40073 LSC2YGR244C 1284 nt8.95□□□□□ -0.98
SHO1P40073 YHL019W-AYHL019W-A 594 nt8.94□□□□□ -0.98
SHO1P40073 RBG1YAL036C 1110 nt8.94□□□□□ -0.98
SHO1P40073 SHH4YLR164W 507 nt8.94□□□□□ -0.98
SHO1P40073 NDI1YML120C 1542 nt8.94□□□□□ -0.98
SHO1P40073 GLR1YPL091W 1452 nt8.92□□□□□ -0.98
SHO1P40073 ARP6YLR085C 1317 nt8.92□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms