Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 FMT1YBL013W 1206 nt10.58□□□□□ -0.72
TDA11P38854 ADH2YMR303C 1047 nt10.58□□□□□ -0.72
TDA11P38854 CMP2YML057W 1815 nt10.57□□□□□ -0.72
TDA11P38854 MXR2YCL033C 507 nt10.57□□□□□ -0.72
TDA11P38854 HSL7YBR133C 2484 nt10.56□□□□□ -0.72
TDA11P38854 MIC10YCL057C-A 294 nt10.55□□□□□ -0.72
TDA11P38854 HEM12YDR047W 1089 nt10.54□□□□□ -0.72
TDA11P38854 CWP1YKL096W 720 nt10.53□□□□□ -0.72
TDA11P38854 WSC2YNL283C 1512 nt10.51□□□□□ -0.73
TDA11P38854 TCD2YKL027W 1344 nt10.51□□□□□ -0.73
TDA11P38854 IRC24YIR036C 792 nt10.48□□□□□ -0.73
TDA11P38854 SNG1YGR197C 1644 nt10.47□□□□□ -0.73
TDA11P38854 YGR259CYGR259C 441 nt10.46□□□□□ -0.73
TDA11P38854 ATF2YGR177C 1608 nt10.46□□□□□ -0.74
TDA11P38854 YIH1YCR059C 777 nt10.45□□□□□ -0.74
TDA11P38854 FRD1YEL047C 1413 nt10.44□□□□□ -0.74
TDA11P38854 YLL053CYLL053C 459 nt10.43□□□□□ -0.74
TDA11P38854 UBX6YJL048C 1191 nt10.42□□□□□ -0.74
TDA11P38854 YAT1YAR035W 2064 nt10.4□□□□□ -0.74
TDA11P38854 YCL074WYCL074W 927 nt10.39□□□□□ -0.75
TDA11P38854 YFL067WYFL067W 528 nt10.39□□□□□ -0.75
TDA11P38854 SOR2YDL246C 1074 nt10.38□□□□□ -0.75
TDA11P38854 HUA1YGR268C 597 nt10.38□□□□□ -0.75
TDA11P38854 SOR1YJR159W 1074 nt10.38□□□□□ -0.75
TDA11P38854 RDN25-1RDN25-1 3396 nt10.38□□□□□ -0.75
TDA11P38854 RDN25-2RDN25-2 3396 nt10.38□□□□□ -0.75
TDA11P38854 AGP1YCL025C 1902 nt10.37□□□□□ -0.75
TDA11P38854 RNQ1YCL028W 1218 nt10.35□□□□□ -0.75
TDA11P38854 DUS1YML080W 1272 nt10.34□□□□□ -0.75
TDA11P38854 NDI1YML120C 1542 nt10.33□□□□□ -0.76
TDA11P38854 YDR094WYDR094W 336 nt10.3□□□□□ -0.76
TDA11P38854 FTR1YER145C 1215 nt10.3□□□□□ -0.76
TDA11P38854 MIC12YBR262C 321 nt10.28□□□□□ -0.76
TDA11P38854 YCL042WYCL042W 360 nt10.28□□□□□ -0.76
TDA11P38854 TRM5YHR070W 1500 nt10.28□□□□□ -0.76
TDA11P38854 BNA2YJR078W 1362 nt10.27□□□□□ -0.76
TDA11P38854 YLR235CYLR235C 399 nt10.27□□□□□ -0.77
TDA11P38854 DDR2YOL052C-A 186 nt10.26□□□□□ -0.77
TDA11P38854 GAL1YBR020W 1587 nt10.26□□□□□ -0.77
TDA11P38854 YDL086C-AYDL086C-A 435 nt10.25□□□□□ -0.77
TDA11P38854 YKL030WYKL030W 606 nt10.25□□□□□ -0.77
TDA11P38854 ANP1YEL036C 1503 nt10.23□□□□□ -0.77
TDA11P38854 PTH1YHR189W 573 nt10.23□□□□□ -0.77
TDA11P38854 HEL2YDR266C 1920 nt10.2□□□□□ -0.78
TDA11P38854 RDN18-1RDN18-1 1800 nt10.2□□□□□ -0.78
TDA11P38854 RDN18-2RDN18-2 1800 nt10.2□□□□□ -0.78
TDA11P38854 SPT20YOL148C 1815 nt10.2□□□□□ -0.78
TDA11P38854 YFL015W-AYFL015W-A 318 nt10.16□□□□□ -0.78
TDA11P38854 HHO1YPL127C 777 nt10.15□□□□□ -0.78
TDA11P38854 STR3YGL184C 1398 nt10.13□□□□□ -0.79
TDA11P38854 XDJ1YLR090W 1380 nt10.13□□□□□ -0.79
TDA11P38854 RPC82YPR190C 1965 nt10.11□□□□□ -0.79
TDA11P38854 DIC1YLR348C 897 nt10.1□□□□□ -0.79
TDA11P38854 TIM23YNR017W 669 nt10.06□□□□□ -0.8
TDA11P38854 FEN2YCR028C 1539 nt10.06□□□□□ -0.8
TDA11P38854 AQY1YPR192W 918 nt10.05□□□□□ -0.8
TDA11P38854 INA1YLR413W 2028 nt10.05□□□□□ -0.8
TDA11P38854 YDR524C-BYDR524C-B 201 nt10.04□□□□□ -0.8
TDA11P38854 YGR201CYGR201C 678 nt10.04□□□□□ -0.8
TDA11P38854 RIM8YGL045W 1629 nt10.04□□□□□ -0.8
TDA11P38854 RTN2YDL204W 1182 nt10.03□□□□□ -0.8
TDA11P38854 GDH3YAL062W 1374 nt10.02□□□□□ -0.8
TDA11P38854 SPC25YER018C 666 nt10.02□□□□□ -0.81
TDA11P38854 YFR018CYFR018C 1092 nt10.02□□□□□ -0.81
TDA11P38854 tL(GAG)GtL(GAG)G 82 nt10.02□□□□□ -0.81
TDA11P38854 STB1YNL309W 1263 nt10.02□□□□□ -0.81
TDA11P38854 DUT1YBR252W 444 nt10.01□□□□□ -0.81
TDA11P38854 YIR016WYIR016W 798 nt9.99□□□□□ -0.81
TDA11P38854 YGL114WYGL114W 2178 nt9.98□□□□□ -0.81
TDA11P38854 AQY2YLL052C 450 nt9.97□□□□□ -0.81
TDA11P38854 YLR179CYLR179C 606 nt9.97□□□□□ -0.81
TDA11P38854 GPI16YHR188C 1833 nt9.96□□□□□ -0.81
TDA11P38854 AHT1YHR093W 549 nt9.96□□□□□ -0.82
TDA11P38854 YPR064WYPR064W 420 nt9.95□□□□□ -0.82
TDA11P38854 PAU16YKL224C 372 nt9.93□□□□□ -0.82
TDA11P38854 TAD3YLR316C 969 nt9.93□□□□□ -0.82
TDA11P38854 HIF1YLL022C 1158 nt9.92□□□□□ -0.82
TDA11P38854 MUP1YGR055W 1725 nt9.91□□□□□ -0.82
TDA11P38854 VPS60YDR486C 690 nt9.91□□□□□ -0.82
TDA11P38854 PRE6YOL038W 765 nt9.88□□□□□ -0.83
TDA11P38854 MAE1YKL029C 2010 nt9.87□□□□□ -0.83
TDA11P38854 RRT5YFR032C 870 nt9.87□□□□□ -0.83
TDA11P38854 ALG3YBL082C 1377 nt9.86□□□□□ -0.83
TDA11P38854 CCT4YDL143W 1587 nt9.84□□□□□ -0.83
TDA11P38854 GOR1YNL274C 1053 nt9.84□□□□□ -0.83
TDA11P38854 ALD4YOR374W 1560 nt9.84□□□□□ -0.83
TDA11P38854 AVT6YER119C 1347 nt9.83□□□□□ -0.84
TDA11P38854 HOL1YNR055C 1761 nt9.82□□□□□ -0.84
TDA11P38854 PRM5YIL117C 957 nt9.8□□□□□ -0.84
TDA11P38854 PLB1YMR008C 1995 nt9.79□□□□□ -0.84
TDA11P38854 BDH1YAL060W 1149 nt9.79□□□□□ -0.84
TDA11P38854 SBA1YKL117W 651 nt9.78□□□□□ -0.84
TDA11P38854 PEX25YPL112C 1185 nt9.78□□□□□ -0.84
TDA11P38854 YSP3YOR003W 1437 nt9.78□□□□□ -0.84
TDA11P38854 SWC5YBR231C 912 nt9.77□□□□□ -0.85
TDA11P38854 YFL066CYFL066C 1179 nt9.75□□□□□ -0.85
TDA11P38854 MET2YNL277W 1461 nt9.72□□□□□ -0.85
TDA11P38854 ZRT3YKL175W 1512 nt9.71□□□□□ -0.86
TDA11P38854 ACO2YJL200C 2370 nt9.7□□□□□ -0.86
TDA11P38854 YLR415CYLR415C 339 nt9.7□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms