Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 GAL1YBR020W 1587 nt14.6□□□□□ -0.07
RTG3P38165 YPR064WYPR064W 420 nt14.58□□□□□ -0.08
RTG3P38165 BMT5YIL096C 1011 nt14.57□□□□□ -0.08
RTG3P38165 PIB2YGL023C 1908 nt14.56□□□□□ -0.08
RTG3P38165 TRM5YHR070W 1500 nt14.56□□□□□ -0.08
RTG3P38165 tL(GAG)GtL(GAG)G 82 nt14.56□□□□□ -0.08
RTG3P38165 TAD3YLR316C 969 nt14.54□□□□□ -0.08
RTG3P38165 ATF2YGR177C 1608 nt14.54□□□□□ -0.08
RTG3P38165 RTF1YGL244W 1677 nt14.46□□□□□ -0.09
RTG3P38165 LYS4YDR234W 2082 nt14.46□□□□□ -0.09
RTG3P38165 PRE6YOL038W 765 nt14.45□□□□□ -0.1
RTG3P38165 AQY1YPR192W 918 nt14.45□□□□□ -0.1
RTG3P38165 Q0010Q0010 387 nt14.45□□□□□ -0.1
RTG3P38165 ERF2YLR246W 1080 nt14.44□□□□□ -0.1
RTG3P38165 BOP3YNL042W 1191 nt14.44□□□□□ -0.1
RTG3P38165 CRR1YLR213C 1269 nt14.43□□□□□ -0.1
RTG3P38165 STB1YNL309W 1263 nt14.43□□□□□ -0.1
RTG3P38165 YFR018CYFR018C 1092 nt14.42□□□□□ -0.1
RTG3P38165 YFL015W-AYFL015W-A 318 nt14.41□□□□□ -0.1
RTG3P38165 SPC25YER018C 666 nt14.4□□□□□ -0.1
RTG3P38165 BDH1YAL060W 1149 nt14.39□□□□□ -0.11
RTG3P38165 DDR2YOL052C-A 186 nt14.39□□□□□ -0.11
RTG3P38165 YDR524C-BYDR524C-B 201 nt14.38□□□□□ -0.11
RTG3P38165 YFL067WYFL067W 528 nt14.37□□□□□ -0.11
RTG3P38165 CCT4YDL143W 1587 nt14.36□□□□□ -0.11
RTG3P38165 YFL066CYFL066C 1179 nt14.36□□□□□ -0.11
RTG3P38165 MIC10YCL057C-A 294 nt14.36□□□□□ -0.11
RTG3P38165 PAU16YKL224C 372 nt14.35□□□□□ -0.11
RTG3P38165 YDL086C-AYDL086C-A 435 nt14.34□□□□□ -0.11
RTG3P38165 SNG1YGR197C 1644 nt14.33□□□□□ -0.12
RTG3P38165 PTK1YKL198C 1989 nt14.33□□□□□ -0.12
RTG3P38165 VPS60YDR486C 690 nt14.32□□□□□ -0.12
RTG3P38165 YSP3YOR003W 1437 nt14.32□□□□□ -0.12
RTG3P38165 Q0144Q0144 330 nt14.31□□□□□ -0.12
RTG3P38165 ALG3YBL082C 1377 nt14.3□□□□□ -0.12
RTG3P38165 ANP1YEL036C 1503 nt14.3□□□□□ -0.12
RTG3P38165 GPI16YHR188C 1833 nt14.28□□□□□ -0.12
RTG3P38165 FEN2YCR028C 1539 nt14.27□□□□□ -0.12
RTG3P38165 HEM12YDR047W 1089 nt14.27□□□□□ -0.13
RTG3P38165 YIR018C-AYIR018C-A 138 nt14.26□□□□□ -0.13
RTG3P38165 PEX25YPL112C 1185 nt14.24□□□□□ -0.13
RTG3P38165 YLR415CYLR415C 339 nt14.23□□□□□ -0.13
RTG3P38165 YNL115CYNL115C 1935 nt14.23□□□□□ -0.13
RTG3P38165 SRN2YLR119W 642 nt14.22□□□□□ -0.13
RTG3P38165 SWC5YBR231C 912 nt14.22□□□□□ -0.13
RTG3P38165 RRT5YFR032C 870 nt14.21□□□□□ -0.13
RTG3P38165 SEM1YDR363W-A 270 nt14.2□□□□□ -0.14
RTG3P38165 ARA2YMR041C 1008 nt14.19□□□□□ -0.14
RTG3P38165 YIR016WYIR016W 798 nt14.15□□□□□ -0.14
RTG3P38165 YHR056W-AYHR056W-A 435 nt14.08□□□□□ -0.16
RTG3P38165 YEL009C-AYEL009C-A 408 nt14.06□□□□□ -0.16
RTG3P38165 SPT8YLR055C 1809 nt14.05□□□□□ -0.16
RTG3P38165 YFL054CYFL054C 1941 nt14.05□□□□□ -0.16
RTG3P38165 YLR122CYLR122C 378 nt13.99□□□□□ -0.17
RTG3P38165 MIC12YBR262C 321 nt13.96□□□□□ -0.17
RTG3P38165 VPS75YNL246W 795 nt13.95□□□□□ -0.18
RTG3P38165 RAX1YOR301W 1308 nt13.94□□□□□ -0.18
RTG3P38165 SBA1YKL117W 651 nt13.94□□□□□ -0.18
RTG3P38165 MIR1YJR077C 936 nt13.93□□□□□ -0.18
RTG3P38165 BNA2YJR078W 1362 nt13.92□□□□□ -0.18
RTG3P38165 SHM2YLR058C 1410 nt13.91□□□□□ -0.18
RTG3P38165 MET8YBR213W 825 nt13.91□□□□□ -0.18
RTG3P38165 XDJ1YLR090W 1380 nt13.91□□□□□ -0.18
RTG3P38165 ABZ2YMR289W 1125 nt13.89□□□□□ -0.19
RTG3P38165 ARP10YDR106W 855 nt13.87□□□□□ -0.19
RTG3P38165 TIM17YJL143W 477 nt13.87□□□□□ -0.19
RTG3P38165 NAT4YMR069W 858 nt13.87□□□□□ -0.19
RTG3P38165 GLK1YCL040W 1503 nt13.85□□□□□ -0.19
RTG3P38165 THI74YDR438W 1113 nt13.83□□□□□ -0.2
RTG3P38165 NIT1YIL164C 600 nt13.83□□□□□ -0.2
RTG3P38165 HHO1YPL127C 777 nt13.82□□□□□ -0.2
RTG3P38165 GDH3YAL062W 1374 nt13.82□□□□□ -0.2
RTG3P38165 MSF1YPR047W 1410 nt13.81□□□□□ -0.2
RTG3P38165 SGT2YOR007C 1041 nt13.78□□□□□ -0.2
RTG3P38165 CCA1YER168C 1641 nt13.77□□□□□ -0.21
RTG3P38165 SWE1YJL187C 2460 nt13.77□□□□□ -0.21
RTG3P38165 AGP1YCL025C 1902 nt13.77□□□□□ -0.21
RTG3P38165 DUT1YBR252W 444 nt13.75□□□□□ -0.21
RTG3P38165 CLB6YGR109C 1143 nt13.74□□□□□ -0.21
RTG3P38165 DAT1YML113W 747 nt13.74□□□□□ -0.21
RTG3P38165 YGR201CYGR201C 678 nt13.73□□□□□ -0.21
RTG3P38165 PAU7YAR020C 168 nt13.73□□□□□ -0.21
RTG3P38165 SHB17YKR043C 816 nt13.72□□□□□ -0.21
RTG3P38165 YDR010CYDR010C 333 nt13.7□□□□□ -0.22
RTG3P38165 AVT6YER119C 1347 nt13.69□□□□□ -0.22
RTG3P38165 UBA4YHR111W 1323 nt13.67□□□□□ -0.22
RTG3P38165 YCR099CYCR099C 468 nt13.67□□□□□ -0.22
RTG3P38165 TOM20YGR082W 552 nt13.63□□□□□ -0.23
RTG3P38165 AI3Q0060 1248 nt13.6□□□□□ -0.23
RTG3P38165 YGL034CYGL034C 366 nt13.6□□□□□ -0.23
RTG3P38165 PET20YPL159C 762 nt13.6□□□□□ -0.23
RTG3P38165 UTP6YDR449C 1323 nt13.58□□□□□ -0.24
RTG3P38165 GOR1YNL274C 1053 nt13.57□□□□□ -0.24
RTG3P38165 YSR3YKR053C 1215 nt13.56□□□□□ -0.24
RTG3P38165 XYL2YLR070C 1071 nt13.56□□□□□ -0.24
RTG3P38165 LCP5YER127W 1074 nt13.54□□□□□ -0.24
RTG3P38165 Q0142Q0142 177 nt13.53□□□□□ -0.24
RTG3P38165 RET2YFR051C 1641 nt13.5□□□□□ -0.25
RTG3P38165 PHO89YBR296C 1725 nt13.5□□□□□ -0.25
RTG3P38165 YCR102CYCR102C 1107 nt13.45□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms