Protein–RNA interactions for Protein: P35995

YKL222C, Uncharacterized transcriptional regulatory protein YKL222C, yeastyeast

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKL222CP35995 YGL034CYGL034C 366 nt13.13□□□□□ -0.31
YKL222CP35995 GAL1YBR020W 1587 nt13.11□□□□□ -0.31
YKL222CP35995 CCT4YDL143W 1587 nt13.11□□□□□ -0.31
YKL222CP35995 PAU7YAR020C 168 nt13.09□□□□□ -0.31
YKL222CP35995 STB1YNL309W 1263 nt13.09□□□□□ -0.31
YKL222CP35995 NDI1YML120C 1542 nt13.08□□□□□ -0.31
YKL222CP35995 SCC4YER147C 1875 nt13.07□□□□□ -0.32
YKL222CP35995 SPC25YER018C 666 nt13.06□□□□□ -0.32
YKL222CP35995 SWC5YBR231C 912 nt13.06□□□□□ -0.32
YKL222CP35995 TRM5YHR070W 1500 nt13.05□□□□□ -0.32
YKL222CP35995 BIO4YNR057C 714 nt13.03□□□□□ -0.32
YKL222CP35995 GPI16YHR188C 1833 nt13.02□□□□□ -0.32
YKL222CP35995 YDR524C-BYDR524C-B 201 nt13.01□□□□□ -0.33
YKL222CP35995 YNL195CYNL195C 786 nt13.01□□□□□ -0.33
YKL222CP35995 UBA4YHR111W 1323 nt13.01□□□□□ -0.33
YKL222CP35995 SDH1YKL148C 1923 nt12.99□□□□□ -0.33
YKL222CP35995 RBG1YAL036C 1110 nt12.98□□□□□ -0.33
YKL222CP35995 SIM1YIL123W 1431 nt12.97□□□□□ -0.33
YKL222CP35995 YSR3YKR053C 1215 nt12.97□□□□□ -0.33
YKL222CP35995 VPS60YDR486C 690 nt12.96□□□□□ -0.33
YKL222CP35995 DDR2YOL052C-A 186 nt12.96□□□□□ -0.33
YKL222CP35995 SPT8YLR055C 1809 nt12.96□□□□□ -0.33
YKL222CP35995 SAM1YLR180W 1149 nt12.95□□□□□ -0.34
YKL222CP35995 YMR226CYMR226C 804 nt12.95□□□□□ -0.34
YKL222CP35995 XYL2YLR070C 1071 nt12.91□□□□□ -0.34
YKL222CP35995 RPM1RPM1 483 nt12.9□□□□□ -0.34
YKL222CP35995 SHB17YKR043C 816 nt12.89□□□□□ -0.35
YKL222CP35995 ALG3YBL082C 1377 nt12.89□□□□□ -0.35
YKL222CP35995 YFL067WYFL067W 528 nt12.87□□□□□ -0.35
YKL222CP35995 ATF2YGR177C 1608 nt12.84□□□□□ -0.35
YKL222CP35995 FEN2YCR028C 1539 nt12.83□□□□□ -0.35
YKL222CP35995 YDL086C-AYDL086C-A 435 nt12.83□□□□□ -0.36
YKL222CP35995 TIM17YJL143W 477 nt12.83□□□□□ -0.36
YKL222CP35995 YCR087WYCR087W 516 nt12.79□□□□□ -0.36
YKL222CP35995 YBR220CYBR220C 1683 nt12.78□□□□□ -0.36
YKL222CP35995 RRT12YCR045C 1476 nt12.78□□□□□ -0.36
YKL222CP35995 RAD51YER095W 1203 nt12.77□□□□□ -0.37
YKL222CP35995 ERF2YLR246W 1080 nt12.77□□□□□ -0.37
YKL222CP35995 ANP1YEL036C 1503 nt12.73□□□□□ -0.37
YKL222CP35995 AIM45YPR004C 1035 nt12.73□□□□□ -0.37
YKL222CP35995 PHO89YBR296C 1725 nt12.72□□□□□ -0.37
YKL222CP35995 YDR010CYDR010C 333 nt12.72□□□□□ -0.37
YKL222CP35995 SSA4YER103W 1929 nt12.7□□□□□ -0.38
YKL222CP35995 YIR016WYIR016W 798 nt12.7□□□□□ -0.38
YKL222CP35995 YLR111WYLR111W 333 nt12.69□□□□□ -0.38
YKL222CP35995 RET2YFR051C 1641 nt12.67□□□□□ -0.38
YKL222CP35995 SHM2YLR058C 1410 nt12.65□□□□□ -0.38
YKL222CP35995 CRR1YLR213C 1269 nt12.65□□□□□ -0.38
YKL222CP35995 YNR029CYNR029C 1290 nt12.64□□□□□ -0.39
YKL222CP35995 MRP20YDR405W 792 nt12.61□□□□□ -0.39
YKL222CP35995 PAC11YDR488C 1602 nt12.6□□□□□ -0.39
YKL222CP35995 SNG1YGR197C 1644 nt12.6□□□□□ -0.39
YKL222CP35995 SGT2YOR007C 1041 nt12.59□□□□□ -0.39
YKL222CP35995 STE4YOR212W 1272 nt12.59□□□□□ -0.39
YKL222CP35995 HEM12YDR047W 1089 nt12.57□□□□□ -0.4
YKL222CP35995 YHL050CYHL050C 2094 nt12.56□□□□□ -0.4
YKL222CP35995 XDJ1YLR090W 1380 nt12.54□□□□□ -0.4
YKL222CP35995 NIT1YIL164C 600 nt12.51□□□□□ -0.41
YKL222CP35995 YLR349WYLR349W 507 nt12.51□□□□□ -0.41
YKL222CP35995 MIC10YCL057C-A 294 nt12.5□□□□□ -0.41
YKL222CP35995 ADH7YCR105W 1086 nt12.49□□□□□ -0.41
YKL222CP35995 PAU15YIR041W 375 nt12.48□□□□□ -0.41
YKL222CP35995 COQ2YNR041C 1119 nt12.48□□□□□ -0.41
YKL222CP35995 SDH5YOL071W 489 nt12.46□□□□□ -0.41
YKL222CP35995 NVJ2YPR091C 2313 nt12.46□□□□□ -0.41
YKL222CP35995 GDH3YAL062W 1374 nt12.44□□□□□ -0.42
YKL222CP35995 RAD23YEL037C 1197 nt12.39□□□□□ -0.43
YKL222CP35995 FUN14YAL008W 597 nt12.39□□□□□ -0.43
YKL222CP35995 BNA2YJR078W 1362 nt12.39□□□□□ -0.43
YKL222CP35995 BDF1YLR399C 2061 nt12.38□□□□□ -0.43
YKL222CP35995 RPL4BYDR012W 1089 nt12.37□□□□□ -0.43
YKL222CP35995 RPL4AYBR031W 1089 nt12.37□□□□□ -0.43
YKL222CP35995 YLR437C-AYLR437C-A 228 nt12.35□□□□□ -0.43
YKL222CP35995 YLR279WYLR279W 390 nt12.34□□□□□ -0.43
YKL222CP35995 LYS4YDR234W 2082 nt12.33□□□□□ -0.44
YKL222CP35995 CLB6YGR109C 1143 nt12.32□□□□□ -0.44
YKL222CP35995 YJL195CYJL195C 702 nt12.32□□□□□ -0.44
YKL222CP35995 SFA1YDL168W 1161 nt12.3□□□□□ -0.44
YKL222CP35995 MIC12YBR262C 321 nt12.27□□□□□ -0.45
YKL222CP35995 YHL019W-AYHL019W-A 594 nt12.26□□□□□ -0.45
YKL222CP35995 RPS14BYJL191W 417 nt12.26□□□□□ -0.45
YKL222CP35995 YGR201CYGR201C 678 nt12.25□□□□□ -0.45
YKL222CP35995 SEC11YIR022W 504 nt12.24□□□□□ -0.45
YKL222CP35995 RIB3YDR487C 627 nt12.23□□□□□ -0.45
YKL222CP35995 GPN2YOR262W 1044 nt12.23□□□□□ -0.45
YKL222CP35995 AVT6YER119C 1347 nt12.22□□□□□ -0.45
YKL222CP35995 HHO1YPL127C 777 nt12.22□□□□□ -0.45
YKL222CP35995 tS(GCU)LtS(GCU)L 80 nt12.21□□□□□ -0.45
YKL222CP35995 NCP1YHR042W 2076 nt12.21□□□□□ -0.45
YKL222CP35995 YCR102CYCR102C 1107 nt12.2□□□□□ -0.46
YKL222CP35995 CAB5YDR196C 726 nt12.2□□□□□ -0.46
YKL222CP35995 ESS1YJR017C 513 nt12.2□□□□□ -0.46
YKL222CP35995 YGR012WYGR012W 1182 nt12.19□□□□□ -0.46
YKL222CP35995 TSC10YBR265W 963 nt12.19□□□□□ -0.46
YKL222CP35995 TAT1YBR069C 1860 nt12.19□□□□□ -0.46
YKL222CP35995 UTH1YKR042W 1098 nt12.18□□□□□ -0.46
YKL222CP35995 CPD1YGR247W 720 nt12.15□□□□□ -0.46
YKL222CP35995 YHR056W-AYHR056W-A 435 nt12.15□□□□□ -0.46
YKL222CP35995 GOR1YNL274C 1053 nt12.15□□□□□ -0.46
YKL222CP35995 ADH1YOL086C 1047 nt12.14□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms