Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 FRD1YEL047C 1413 nt11.24□□□□□ -0.61
DEF1P35732 URA8YJR103W 1737 nt11.23□□□□□ -0.61
DEF1P35732 FMP52YER004W 696 nt11.22□□□□□ -0.61
DEF1P35732 SOR2YDL246C 1074 nt11.21□□□□□ -0.61
DEF1P35732 SOR1YJR159W 1074 nt11.21□□□□□ -0.61
DEF1P35732 RTG1YOL067C 534 nt11.19□□□□□ -0.62
DEF1P35732 RRT12YCR045C 1476 nt11.18□□□□□ -0.62
DEF1P35732 YCL042WYCL042W 360 nt11.16□□□□□ -0.62
DEF1P35732 BIO5YNR056C 1686 nt11.15□□□□□ -0.62
DEF1P35732 RIM8YGL045W 1629 nt11.14□□□□□ -0.63
DEF1P35732 NDI1YML120C 1542 nt11.14□□□□□ -0.63
DEF1P35732 YEL076C-AYEL076C-A 651 nt11.13□□□□□ -0.63
DEF1P35732 YEL076CYEL076C 651 nt11.13□□□□□ -0.63
DEF1P35732 YLR464WYLR464W 651 nt11.13□□□□□ -0.63
DEF1P35732 YNL195CYNL195C 786 nt11.13□□□□□ -0.63
DEF1P35732 GAL2YLR081W 1725 nt11.12□□□□□ -0.63
DEF1P35732 ADO1YJR105W 1023 nt11.11□□□□□ -0.63
DEF1P35732 SNG1YGR197C 1644 nt11.09□□□□□ -0.63
DEF1P35732 CWP1YKL096W 720 nt11.08□□□□□ -0.64
DEF1P35732 SWE1YJL187C 2460 nt11.08□□□□□ -0.64
DEF1P35732 ADH2YMR303C 1047 nt11.07□□□□□ -0.64
DEF1P35732 YGL114WYGL114W 2178 nt11.05□□□□□ -0.64
DEF1P35732 PCM1YEL058W 1674 nt11.04□□□□□ -0.64
DEF1P35732 NCP1YHR042W 2076 nt11.04□□□□□ -0.64
DEF1P35732 TOK1YJL093C 2076 nt11.04□□□□□ -0.64
DEF1P35732 YLR235CYLR235C 399 nt11.02□□□□□ -0.65
DEF1P35732 ACO2YJL200C 2370 nt11.02□□□□□ -0.65
DEF1P35732 PTH1YHR189W 573 nt11.01□□□□□ -0.65
DEF1P35732 PRP4YPR178W 1398 nt11□□□□□ -0.65
DEF1P35732 SNF6YHL025W 999 nt10.98□□□□□ -0.65
DEF1P35732 THI72YOR192C 1800 nt10.98□□□□□ -0.65
DEF1P35732 YKL030WYKL030W 606 nt10.97□□□□□ -0.65
DEF1P35732 HUA1YGR268C 597 nt10.96□□□□□ -0.65
DEF1P35732 DPS1YLL018C 1674 nt10.95□□□□□ -0.66
DEF1P35732 HEM14YER014W 1620 nt10.93□□□□□ -0.66
DEF1P35732 YIH1YCR059C 777 nt10.91□□□□□ -0.66
DEF1P35732 DIC1YLR348C 897 nt10.91□□□□□ -0.66
DEF1P35732 RNQ1YCL028W 1218 nt10.91□□□□□ -0.66
DEF1P35732 FUR4YBR021W 1902 nt10.91□□□□□ -0.66
DEF1P35732 GPI16YHR188C 1833 nt10.91□□□□□ -0.66
DEF1P35732 SPT20YOL148C 1815 nt10.89□□□□□ -0.67
DEF1P35732 TIM23YNR017W 669 nt10.86□□□□□ -0.67
DEF1P35732 SNF1YDR477W 1902 nt10.85□□□□□ -0.67
DEF1P35732 BIO4YNR057C 714 nt10.84□□□□□ -0.67
DEF1P35732 SIM1YIL123W 1431 nt10.82□□□□□ -0.68
DEF1P35732 NRT1YOR071C 1797 nt10.8□□□□□ -0.68
DEF1P35732 YLL053CYLL053C 459 nt10.79□□□□□ -0.68
DEF1P35732 YLR179CYLR179C 606 nt10.78□□□□□ -0.68
DEF1P35732 BMT6YLR063W 1098 nt10.75□□□□□ -0.69
DEF1P35732 YDR094WYDR094W 336 nt10.73□□□□□ -0.69
DEF1P35732 FTR1YER145C 1215 nt10.73□□□□□ -0.69
DEF1P35732 AHT1YHR093W 549 nt10.73□□□□□ -0.69
DEF1P35732 WSC2YNL283C 1512 nt10.73□□□□□ -0.69
DEF1P35732 YPR064WYPR064W 420 nt10.72□□□□□ -0.69
DEF1P35732 AQY1YPR192W 918 nt10.71□□□□□ -0.69
DEF1P35732 tL(GAG)GtL(GAG)G 82 nt10.7□□□□□ -0.7
DEF1P35732 GAL1YBR020W 1587 nt10.69□□□□□ -0.7
DEF1P35732 ERF2YLR246W 1080 nt10.67□□□□□ -0.7
DEF1P35732 TAD3YLR316C 969 nt10.67□□□□□ -0.7
DEF1P35732 TRM5YHR070W 1500 nt10.65□□□□□ -0.7
DEF1P35732 FRA1YLL029W 2250 nt10.64□□□□□ -0.71
DEF1P35732 ATF2YGR177C 1608 nt10.63□□□□□ -0.71
DEF1P35732 CRR1YLR213C 1269 nt10.63□□□□□ -0.71
DEF1P35732 LYS4YDR234W 2082 nt10.62□□□□□ -0.71
DEF1P35732 YFL067WYFL067W 528 nt10.61□□□□□ -0.71
DEF1P35732 MUP1YGR055W 1725 nt10.61□□□□□ -0.71
DEF1P35732 YHL008CYHL008C 1884 nt10.6□□□□□ -0.71
DEF1P35732 SPC25YER018C 666 nt10.6□□□□□ -0.71
DEF1P35732 STB1YNL309W 1263 nt10.59□□□□□ -0.71
DEF1P35732 HXK1YFR053C 1458 nt10.59□□□□□ -0.71
DEF1P35732 RSC4YKR008W 1878 nt10.58□□□□□ -0.72
DEF1P35732 DDR2YOL052C-A 186 nt10.58□□□□□ -0.72
DEF1P35732 YFR018CYFR018C 1092 nt10.57□□□□□ -0.72
DEF1P35732 YDL086C-AYDL086C-A 435 nt10.55□□□□□ -0.72
DEF1P35732 YDR524C-BYDR524C-B 201 nt10.54□□□□□ -0.72
DEF1P35732 CCT4YDL143W 1587 nt10.53□□□□□ -0.72
DEF1P35732 BDH1YAL060W 1149 nt10.52□□□□□ -0.73
DEF1P35732 ANP1YEL036C 1503 nt10.52□□□□□ -0.73
DEF1P35732 RPC82YPR190C 1965 nt10.51□□□□□ -0.73
DEF1P35732 MTO1YGL236C 2010 nt10.5□□□□□ -0.73
DEF1P35732 HEM12YDR047W 1089 nt10.5□□□□□ -0.73
DEF1P35732 ALD5YER073W 1563 nt10.5□□□□□ -0.73
DEF1P35732 YSP3YOR003W 1437 nt10.49□□□□□ -0.73
DEF1P35732 VPS60YDR486C 690 nt10.48□□□□□ -0.73
DEF1P35732 IRC24YIR036C 792 nt10.48□□□□□ -0.73
DEF1P35732 MIC10YCL057C-A 294 nt10.48□□□□□ -0.73
DEF1P35732 FEN2YCR028C 1539 nt10.48□□□□□ -0.73
DEF1P35732 YKR005CYKR005C 1578 nt10.48□□□□□ -0.73
DEF1P35732 YFL015W-AYFL015W-A 318 nt10.46□□□□□ -0.73
DEF1P35732 YLR415CYLR415C 339 nt10.45□□□□□ -0.74
DEF1P35732 PRE6YOL038W 765 nt10.45□□□□□ -0.74
DEF1P35732 TOM71YHR117W 1920 nt10.45□□□□□ -0.74
DEF1P35732 ILV3YJR016C 1758 nt10.44□□□□□ -0.74
DEF1P35732 PEX25YPL112C 1185 nt10.44□□□□□ -0.74
DEF1P35732 SWC5YBR231C 912 nt10.44□□□□□ -0.74
DEF1P35732 TPN1YGL186C 1740 nt10.44□□□□□ -0.74
DEF1P35732 ALG3YBL082C 1377 nt10.43□□□□□ -0.74
DEF1P35732 RRT5YFR032C 870 nt10.43□□□□□ -0.74
DEF1P35732 INA1YLR413W 2028 nt10.43□□□□□ -0.74
DEF1P35732 PAU16YKL224C 372 nt10.42□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms