Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 NCP1YHR042W 2076 nt12.03□□□□□ -0.48
CDC48P25694 RRT5YFR032C 870 nt12.03□□□□□ -0.48
CDC48P25694 SPC25YER018C 666 nt12.01□□□□□ -0.49
CDC48P25694 BDH1YAL060W 1149 nt12□□□□□ -0.49
CDC48P25694 ATF2YGR177C 1608 nt12□□□□□ -0.49
CDC48P25694 ERF2YLR246W 1080 nt11.99□□□□□ -0.49
CDC48P25694 STB1YNL309W 1263 nt11.99□□□□□ -0.49
CDC48P25694 YFL067WYFL067W 528 nt11.97□□□□□ -0.49
CDC48P25694 YSP3YOR003W 1437 nt11.96□□□□□ -0.49
CDC48P25694 CRR1YLR213C 1269 nt11.96□□□□□ -0.49
CDC48P25694 PEX25YPL112C 1185 nt11.95□□□□□ -0.5
CDC48P25694 UME6YDR207C 2511 nt11.95□□□□□ -0.5
CDC48P25694 PIB2YGL023C 1908 nt11.94□□□□□ -0.5
CDC48P25694 CCT4YDL143W 1587 nt11.94□□□□□ -0.5
CDC48P25694 YFL066CYFL066C 1179 nt11.93□□□□□ -0.5
CDC48P25694 DDR2YOL052C-A 186 nt11.93□□□□□ -0.5
CDC48P25694 YDR524C-BYDR524C-B 201 nt11.92□□□□□ -0.5
CDC48P25694 GPI16YHR188C 1833 nt11.9□□□□□ -0.5
CDC48P25694 LYS4YDR234W 2082 nt11.9□□□□□ -0.5
CDC48P25694 YDL086C-AYDL086C-A 435 nt11.89□□□□□ -0.51
CDC48P25694 YLR415CYLR415C 339 nt11.89□□□□□ -0.51
CDC48P25694 ANP1YEL036C 1503 nt11.87□□□□□ -0.51
CDC48P25694 VPS60YDR486C 690 nt11.87□□□□□ -0.51
CDC48P25694 YNL115CYNL115C 1935 nt11.87□□□□□ -0.51
CDC48P25694 YJL225CYJL225C 5277 nt11.87□□□□□ -0.51
CDC48P25694 BOP3YNL042W 1191 nt11.86□□□□□ -0.51
CDC48P25694 RTF1YGL244W 1677 nt11.84□□□□□ -0.51
CDC48P25694 SNG1YGR197C 1644 nt11.83□□□□□ -0.52
CDC48P25694 ALG3YBL082C 1377 nt11.83□□□□□ -0.52
CDC48P25694 FEN2YCR028C 1539 nt11.83□□□□□ -0.52
CDC48P25694 SWC5YBR231C 912 nt11.81□□□□□ -0.52
CDC48P25694 HEM12YDR047W 1089 nt11.8□□□□□ -0.52
CDC48P25694 MIC10YCL057C-A 294 nt11.78□□□□□ -0.52
CDC48P25694 RDN37-1RDN37-1 5354 nt11.77□□□□□ -0.53
CDC48P25694 RDN37-2RDN37-2 5354 nt11.77□□□□□ -0.53
CDC48P25694 SBA1YKL117W 651 nt11.77□□□□□ -0.53
CDC48P25694 VPS75YNL246W 795 nt11.74□□□□□ -0.53
CDC48P25694 YIR016WYIR016W 798 nt11.73□□□□□ -0.53
CDC48P25694 SPT8YLR055C 1809 nt11.73□□□□□ -0.53
CDC48P25694 NAT4YMR069W 858 nt11.7□□□□□ -0.54
CDC48P25694 PTK1YKL198C 1989 nt11.7□□□□□ -0.54
CDC48P25694 MIR1YJR077C 936 nt11.68□□□□□ -0.54
CDC48P25694 GLK1YCL040W 1503 nt11.65□□□□□ -0.54
CDC48P25694 YHR056W-AYHR056W-A 435 nt11.64□□□□□ -0.55
CDC48P25694 MSF1YPR047W 1410 nt11.62□□□□□ -0.55
CDC48P25694 THI74YDR438W 1113 nt11.61□□□□□ -0.55
CDC48P25694 BOR1YNL275W 1731 nt11.6□□□□□ -0.55
CDC48P25694 MIC12YBR262C 321 nt11.6□□□□□ -0.55
CDC48P25694 TIM17YJL143W 477 nt11.58□□□□□ -0.56
CDC48P25694 SHM2YLR058C 1410 nt11.54□□□□□ -0.56
CDC48P25694 RAX1YOR301W 1308 nt11.53□□□□□ -0.56
CDC48P25694 XDJ1YLR090W 1380 nt11.53□□□□□ -0.56
CDC48P25694 BNA2YJR078W 1362 nt11.52□□□□□ -0.57
CDC48P25694 DAT1YML113W 747 nt11.5□□□□□ -0.57
CDC48P25694 NIT1YIL164C 600 nt11.48□□□□□ -0.57
CDC48P25694 PAU7YAR020C 168 nt11.47□□□□□ -0.57
CDC48P25694 UBA4YHR111W 1323 nt11.45□□□□□ -0.58
CDC48P25694 YGR201CYGR201C 678 nt11.45□□□□□ -0.58
CDC48P25694 YFL054CYFL054C 1941 nt11.45□□□□□ -0.58
CDC48P25694 GDH3YAL062W 1374 nt11.43□□□□□ -0.58
CDC48P25694 SHB17YKR043C 816 nt11.43□□□□□ -0.58
CDC48P25694 SGT2YOR007C 1041 nt11.43□□□□□ -0.58
CDC48P25694 MCH5YOR306C 1566 nt11.42□□□□□ -0.58
CDC48P25694 YDR010CYDR010C 333 nt11.41□□□□□ -0.58
CDC48P25694 YGL034CYGL034C 366 nt11.4□□□□□ -0.58
CDC48P25694 HHO1YPL127C 777 nt11.4□□□□□ -0.58
CDC48P25694 YSR3YKR053C 1215 nt11.35□□□□□ -0.59
CDC48P25694 YMR244WYMR244W 1068 nt11.35□□□□□ -0.59
CDC48P25694 RET2YFR051C 1641 nt11.33□□□□□ -0.6
CDC48P25694 AVT6YER119C 1347 nt11.3□□□□□ -0.6
CDC48P25694 AGP1YCL025C 1902 nt11.29□□□□□ -0.6
CDC48P25694 XYL2YLR070C 1071 nt11.28□□□□□ -0.6
CDC48P25694 CCA1YER168C 1641 nt11.27□□□□□ -0.6
CDC48P25694 GLR1YPL091W 1452 nt11.27□□□□□ -0.6
CDC48P25694 SWE1YJL187C 2460 nt11.26□□□□□ -0.61
CDC48P25694 YCR087WYCR087W 516 nt11.25□□□□□ -0.61
CDC48P25694 PHO89YBR296C 1725 nt11.25□□□□□ -0.61
CDC48P25694 GOR1YNL274C 1053 nt11.23□□□□□ -0.61
CDC48P25694 DUT1YBR252W 444 nt11.23□□□□□ -0.61
CDC48P25694 NDI1YML120C 1542 nt11.22□□□□□ -0.61
CDC48P25694 YCR102CYCR102C 1107 nt11.21□□□□□ -0.61
CDC48P25694 AIM45YPR004C 1035 nt11.21□□□□□ -0.61
CDC48P25694 RBG1YAL036C 1110 nt11.2□□□□□ -0.62
CDC48P25694 ALG12YNR030W 1656 nt11.18□□□□□ -0.62
CDC48P25694 HSP60YLR259C 1719 nt11.18□□□□□ -0.62
CDC48P25694 SFA1YDL168W 1161 nt11.16□□□□□ -0.62
CDC48P25694 COQ2YNR041C 1119 nt11.15□□□□□ -0.62
CDC48P25694 MRP20YDR405W 792 nt11.12□□□□□ -0.63
CDC48P25694 RBG2YGR173W 1107 nt11.12□□□□□ -0.63
CDC48P25694 NBP35YGL091C 987 nt11.11□□□□□ -0.63
CDC48P25694 YHL019W-AYHL019W-A 594 nt11.06□□□□□ -0.64
CDC48P25694 TIR3YIL011W 810 nt11.06□□□□□ -0.64
CDC48P25694 SHH4YLR164W 507 nt11.04□□□□□ -0.64
CDC48P25694 YMR226CYMR226C 804 nt11.04□□□□□ -0.64
CDC48P25694 STR3YGL184C 1398 nt11.03□□□□□ -0.64
CDC48P25694 RPL4BYDR012W 1089 nt11.02□□□□□ -0.65
CDC48P25694 RPL4AYBR031W 1089 nt11.02□□□□□ -0.65
CDC48P25694 RDN18-1RDN18-1 1800 nt10.99□□□□□ -0.65
CDC48P25694 RDN18-2RDN18-2 1800 nt10.99□□□□□ -0.65
CDC48P25694 DUS1YML080W 1272 nt10.98□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms