Protein–RNA interactions for Protein: P24276

SSD1, Protein SSD1, yeastyeast

Known RBP RIP-Chip data

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSD1P24276 ATF2YGR177C 1608 nt11.89□□□□□ -0.51
SSD1P24276 YFL067WYFL067W 528 nt11.86□□□□□ -0.51
SSD1P24276 SPC25YER018C 666 nt11.85□□□□□ -0.51
SSD1P24276 YFR018CYFR018C 1092 nt11.85□□□□□ -0.51 RIP-Chip
SSD1P24276 STB1YNL309W 1263 nt11.84□□□□□ -0.51
SSD1P24276 LYS4YDR234W 2082 nt11.83□□□□□ -0.51
SSD1P24276 DDR2YOL052C-A 186 nt11.82□□□□□ -0.52
SSD1P24276 YDR524C-BYDR524C-B 201 nt11.79□□□□□ -0.52
SSD1P24276 YJL225CYJL225C 5277 nt11.79□□□□□ -0.52
SSD1P24276 CCT4YDL143W 1587 nt11.79□□□□□ -0.52
SSD1P24276 GPI16YHR188C 1833 nt11.79□□□□□ -0.52
SSD1P24276 YDL086C-AYDL086C-A 435 nt11.78□□□□□ -0.52
SSD1P24276 BDH1YAL060W 1149 nt11.78□□□□□ -0.52
SSD1P24276 ANP1YEL036C 1503 nt11.76□□□□□ -0.53
SSD1P24276 YFL015W-AYFL015W-A 318 nt11.75□□□□□ -0.53
SSD1P24276 SNG1YGR197C 1644 nt11.75□□□□□ -0.53
SSD1P24276 HEM12YDR047W 1089 nt11.74□□□□□ -0.53
SSD1P24276 VPS60YDR486C 690 nt11.73□□□□□ -0.53
SSD1P24276 PTK1YKL198C 1989 nt11.73□□□□□ -0.53
SSD1P24276 PRE6YOL038W 765 nt11.73□□□□□ -0.53
SSD1P24276 YSP3YOR003W 1437 nt11.73□□□□□ -0.53
SSD1P24276 PAU16YKL224C 372 nt11.72□□□□□ -0.53
SSD1P24276 MIC10YCL057C-A 294 nt11.72□□□□□ -0.53
SSD1P24276 YLR415CYLR415C 339 nt11.71□□□□□ -0.53
SSD1P24276 PEX25YPL112C 1185 nt11.71□□□□□ -0.53
SSD1P24276 FEN2YCR028C 1539 nt11.7□□□□□ -0.54
SSD1P24276 RRT5YFR032C 870 nt11.7□□□□□ -0.54
SSD1P24276 SWC5YBR231C 912 nt11.69□□□□□ -0.54
SSD1P24276 ALG3YBL082C 1377 nt11.68□□□□□ -0.54
SSD1P24276 RPM1RPM1 483 nt11.68□□□□□ -0.54
SSD1P24276 YFL066CYFL066C 1179 nt11.65□□□□□ -0.54
SSD1P24276 YNL115CYNL115C 1935 nt11.64□□□□□ -0.55
SSD1P24276 YHR056W-AYHR056W-A 435 nt11.61□□□□□ -0.55
SSD1P24276 FRE6YLL051C 2139 nt11.61□□□□□ -0.55
SSD1P24276 YIR016WYIR016W 798 nt11.59□□□□□ -0.55
SSD1P24276 RDN37-1RDN37-1 5354 nt11.57□□□□□ -0.56
SSD1P24276 RDN37-2RDN37-2 5354 nt11.57□□□□□ -0.56
SSD1P24276 SPT8YLR055C 1809 nt11.55□□□□□ -0.56
SSD1P24276 VPS75YNL246W 795 nt11.52□□□□□ -0.57
SSD1P24276 YFL054CYFL054C 1941 nt11.51□□□□□ -0.57
SSD1P24276 MIC12YBR262C 321 nt11.51□□□□□ -0.57
SSD1P24276 NVJ2YPR091C 2313 nt11.5□□□□□ -0.57
SSD1P24276 RAX1YOR301W 1308 nt11.49□□□□□ -0.57
SSD1P24276 BNA2YJR078W 1362 nt11.48□□□□□ -0.57
SSD1P24276 TIM17YJL143W 477 nt11.44□□□□□ -0.58
SSD1P24276 MIR1YJR077C 936 nt11.42□□□□□ -0.58
SSD1P24276 XDJ1YLR090W 1380 nt11.41□□□□□ -0.58
SSD1P24276 NAT4YMR069W 858 nt11.4□□□□□ -0.58
SSD1P24276 SHM2YLR058C 1410 nt11.4□□□□□ -0.58
SSD1P24276 GLK1YCL040W 1503 nt11.38□□□□□ -0.59
SSD1P24276 YGR201CYGR201C 678 nt11.37□□□□□ -0.59
SSD1P24276 PAC11YDR488C 1602 nt11.35□□□□□ -0.59
SSD1P24276 THI74YDR438W 1113 nt11.34□□□□□ -0.59
SSD1P24276 HHO1YPL127C 777 nt11.33□□□□□ -0.6
SSD1P24276 MSF1YPR047W 1410 nt11.33□□□□□ -0.6
SSD1P24276 GDH3YAL062W 1374 nt11.31□□□□□ -0.6
SSD1P24276 NIT1YIL164C 600 nt11.31□□□□□ -0.6
SSD1P24276 SWE1YJL187C 2460 nt11.31□□□□□ -0.6
SSD1P24276 SBA1YKL117W 651 nt11.29□□□□□ -0.6
SSD1P24276 PAU7YAR020C 168 nt11.29□□□□□ -0.6
SSD1P24276 CCA1YER168C 1641 nt11.28□□□□□ -0.6
SSD1P24276 SGT2YOR007C 1041 nt11.28□□□□□ -0.6
SSD1P24276 AGP1YCL025C 1902 nt11.24□□□□□ -0.61
SSD1P24276 SHB17YKR043C 816 nt11.23□□□□□ -0.61 RIP-Chip
SSD1P24276 DAT1YML113W 747 nt11.23□□□□□ -0.61
SSD1P24276 AVT6YER119C 1347 nt11.22□□□□□ -0.61
SSD1P24276 UBA4YHR111W 1323 nt11.22□□□□□ -0.61
SSD1P24276 YDR010CYDR010C 333 nt11.2□□□□□ -0.62
SSD1P24276 GOR1YNL274C 1053 nt11.16□□□□□ -0.62
SSD1P24276 DUT1YBR252W 444 nt11.14□□□□□ -0.63
SSD1P24276 YGL034CYGL034C 366 nt11.13□□□□□ -0.63
SSD1P24276 YSR3YKR053C 1215 nt11.13□□□□□ -0.63
SSD1P24276 RET2YFR051C 1641 nt11.12□□□□□ -0.63
SSD1P24276 YCR102CYCR102C 1107 nt11.09□□□□□ -0.63
SSD1P24276 PHO89YBR296C 1725 nt11.05□□□□□ -0.64
SSD1P24276 YCR087WYCR087W 516 nt11.04□□□□□ -0.64
SSD1P24276 XYL2YLR070C 1071 nt11.04□□□□□ -0.64
SSD1P24276 DUS1YML080W 1272 nt11.01□□□□□ -0.65
SSD1P24276 NBP35YGL091C 987 nt10.99□□□□□ -0.65
SSD1P24276 SFA1YDL168W 1161 nt10.98□□□□□ -0.65
SSD1P24276 AIM45YPR004C 1035 nt10.98□□□□□ -0.65
SSD1P24276 YCL074WYCL074W 927 nt10.97□□□□□ -0.65
SSD1P24276 STR3YGL184C 1398 nt10.97□□□□□ -0.65
SSD1P24276 YMR244WYMR244W 1068 nt10.96□□□□□ -0.65
SSD1P24276 RBG1YAL036C 1110 nt10.95□□□□□ -0.66
SSD1P24276 RDN18-1RDN18-1 1800 nt10.95□□□□□ -0.66
SSD1P24276 RDN18-2RDN18-2 1800 nt10.95□□□□□ -0.66
SSD1P24276 NDI1YML120C 1542 nt10.94□□□□□ -0.66
SSD1P24276 GLR1YPL091W 1452 nt10.94□□□□□ -0.66
SSD1P24276 COQ2YNR041C 1119 nt10.94□□□□□ -0.66
SSD1P24276 TIR3YIL011W 810 nt10.93□□□□□ -0.66
SSD1P24276 MRP20YDR405W 792 nt10.92□□□□□ -0.66
SSD1P24276 YHL019W-AYHL019W-A 594 nt10.92□□□□□ -0.66
SSD1P24276 FUR4YBR021W 1902 nt10.92□□□□□ -0.66
SSD1P24276 AQY2YLL052C 450 nt10.91□□□□□ -0.66
SSD1P24276 SHH4YLR164W 507 nt10.9□□□□□ -0.66
SSD1P24276 LSC2YGR244C 1284 nt10.84□□□□□ -0.67
SSD1P24276 POM34YLR018C 900 nt10.83□□□□□ -0.68
SSD1P24276 RPL4BYDR012W 1089 nt10.82□□□□□ -0.68
SSD1P24276 RPL4AYBR031W 1089 nt10.82□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 65.7 ms