Protein–RNA interactions for Protein: P0CX27

RPL42A, 60S ribosomal protein L42-A, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42AP0CX27 SNG1YGR197C 1644 nt8.18□□□□□ -1.1
RPL42AP0CX27 ALG12YNR030W 1656 nt8.18□□□□□ -1.1
RPL42AP0CX27 CCA1YER168C 1641 nt8.16□□□□□ -1.1
RPL42AP0CX27 DIC1YLR348C 897 nt8.16□□□□□ -1.1
RPL42AP0CX27 GAL1YBR020W 1587 nt8.15□□□□□ -1.1
RPL42AP0CX27 TRM5YHR070W 1500 nt8.15□□□□□ -1.1
RPL42AP0CX27 YDL086C-AYDL086C-A 435 nt8.14□□□□□ -1.11
RPL42AP0CX27 AQY1YPR192W 918 nt8.14□□□□□ -1.11
RPL42AP0CX27 BNA2YJR078W 1362 nt8.13□□□□□ -1.11
RPL42AP0CX27 PRP4YPR178W 1398 nt8.11□□□□□ -1.11
RPL42AP0CX27 YEL076C-AYEL076C-A 651 nt8.09□□□□□ -1.11
RPL42AP0CX27 YEL076CYEL076C 651 nt8.09□□□□□ -1.11
RPL42AP0CX27 YLR464WYLR464W 651 nt8.09□□□□□ -1.11
RPL42AP0CX27 ANP1YEL036C 1503 nt8.08□□□□□ -1.12
RPL42AP0CX27 BMT6YLR063W 1098 nt8.08□□□□□ -1.12
RPL42AP0CX27 AAC1YMR056C 930 nt8.07□□□□□ -1.12
RPL42AP0CX27 YLR235CYLR235C 399 nt8.04□□□□□ -1.12
RPL42AP0CX27 STB1YNL309W 1263 nt8.04□□□□□ -1.12
RPL42AP0CX27 DPS1YLL018C 1674 nt8.04□□□□□ -1.12
RPL42AP0CX27 WSC2YNL283C 1512 nt8.03□□□□□ -1.12
RPL42AP0CX27 YDR524C-BYDR524C-B 201 nt8.03□□□□□ -1.12
RPL42AP0CX27 SPC25YER018C 666 nt8.03□□□□□ -1.12
RPL42AP0CX27 MIC12YBR262C 321 nt8.03□□□□□ -1.12
RPL42AP0CX27 GPI16YHR188C 1833 nt8.03□□□□□ -1.12
RPL42AP0CX27 DUS1YML080W 1272 nt8.01□□□□□ -1.13
RPL42AP0CX27 TIM23YNR017W 669 nt8.01□□□□□ -1.13
RPL42AP0CX27 FEN2YCR028C 1539 nt8.01□□□□□ -1.13
RPL42AP0CX27 YCL074WYCL074W 927 nt8□□□□□ -1.13
RPL42AP0CX27 HHO1YPL127C 777 nt8□□□□□ -1.13
RPL42AP0CX27 YKR005CYKR005C 1578 nt7.99□□□□□ -1.13
RPL42AP0CX27 YLR179CYLR179C 606 nt7.99□□□□□ -1.13
RPL42AP0CX27 PTH1YHR189W 573 nt7.97□□□□□ -1.13
RPL42AP0CX27 YGR201CYGR201C 678 nt7.95□□□□□ -1.14
RPL42AP0CX27 YGR259CYGR259C 441 nt7.94□□□□□ -1.14
RPL42AP0CX27 YIR016WYIR016W 798 nt7.94□□□□□ -1.14
RPL42AP0CX27 AGP1YCL025C 1902 nt7.93□□□□□ -1.14
RPL42AP0CX27 CCT4YDL143W 1587 nt7.93□□□□□ -1.14
RPL42AP0CX27 VPS60YDR486C 690 nt7.92□□□□□ -1.14
RPL42AP0CX27 IRC24YIR036C 792 nt7.92□□□□□ -1.14
RPL42AP0CX27 SWC5YBR231C 912 nt7.91□□□□□ -1.14
RPL42AP0CX27 NAR1YNL240C 1476 nt7.9□□□□□ -1.14
RPL42AP0CX27 AHT1YHR093W 549 nt7.9□□□□□ -1.14
RPL42AP0CX27 YKL030WYKL030W 606 nt7.88□□□□□ -1.15
RPL42AP0CX27 YPR064WYPR064W 420 nt7.88□□□□□ -1.15
RPL42AP0CX27 SPP1YPL138C 1062 nt7.85□□□□□ -1.15
RPL42AP0CX27 SNF1YDR477W 1902 nt7.85□□□□□ -1.15
RPL42AP0CX27 BIO5YNR056C 1686 nt7.85□□□□□ -1.15
RPL42AP0CX27 XDJ1YLR090W 1380 nt7.84□□□□□ -1.15
RPL42AP0CX27 ALG3YBL082C 1377 nt7.84□□□□□ -1.15
RPL42AP0CX27 GOR1YNL274C 1053 nt7.83□□□□□ -1.16
RPL42AP0CX27 STR3YGL184C 1398 nt7.82□□□□□ -1.16
RPL42AP0CX27 CYT2YKL087C 675 nt7.81□□□□□ -1.16
RPL42AP0CX27 TAD3YLR316C 969 nt7.81□□□□□ -1.16
RPL42AP0CX27 AVT6YER119C 1347 nt7.8□□□□□ -1.16
RPL42AP0CX27 RDN18-1RDN18-1 1800 nt7.78□□□□□ -1.16
RPL42AP0CX27 RDN18-2RDN18-2 1800 nt7.78□□□□□ -1.16
RPL42AP0CX27 RTN2YDL204W 1182 nt7.78□□□□□ -1.16
RPL42AP0CX27 AQY2YLL052C 450 nt7.78□□□□□ -1.16
RPL42AP0CX27 GDH3YAL062W 1374 nt7.77□□□□□ -1.17
RPL42AP0CX27 HSL7YBR133C 2484 nt7.77□□□□□ -1.17
RPL42AP0CX27 PBP1YGR178C 2169 nt7.76□□□□□ -1.17
RPL42AP0CX27 CMP2YML057W 1815 nt7.74□□□□□ -1.17
RPL42AP0CX27 DUT1YBR252W 444 nt7.73□□□□□ -1.17
RPL42AP0CX27 YLR415CYLR415C 339 nt7.72□□□□□ -1.17
RPL42AP0CX27 TIM17YJL143W 477 nt7.69□□□□□ -1.18
RPL42AP0CX27 BDH1YAL060W 1149 nt7.67□□□□□ -1.18
RPL42AP0CX27 RDN25-1RDN25-1 3396 nt7.67□□□□□ -1.18
RPL42AP0CX27 RDN25-2RDN25-2 3396 nt7.67□□□□□ -1.18
RPL42AP0CX27 SHM2YLR058C 1410 nt7.67□□□□□ -1.18
RPL42AP0CX27 tL(GAG)GtL(GAG)G 82 nt7.66□□□□□ -1.18
RPL42AP0CX27 YGR139WYGR139W 339 nt7.65□□□□□ -1.18
RPL42AP0CX27 DAT1YML113W 747 nt7.65□□□□□ -1.18
RPL42AP0CX27 YCR102CYCR102C 1107 nt7.61□□□□□ -1.19
RPL42AP0CX27 NDI1YML120C 1542 nt7.59□□□□□ -1.19
RPL42AP0CX27 HEL2YDR266C 1920 nt7.59□□□□□ -1.19
RPL42AP0CX27 RTG1YOL067C 534 nt7.59□□□□□ -1.19
RPL42AP0CX27 ARP6YLR085C 1317 nt7.58□□□□□ -1.2
RPL42AP0CX27 YSP3YOR003W 1437 nt7.58□□□□□ -1.2
RPL42AP0CX27 NBP35YGL091C 987 nt7.57□□□□□ -1.2
RPL42AP0CX27 PLB1YMR008C 1995 nt7.57□□□□□ -1.2
RPL42AP0CX27 NIT1YIL164C 600 nt7.56□□□□□ -1.2
RPL42AP0CX27 ALD4YOR374W 1560 nt7.55□□□□□ -1.2
RPL42AP0CX27 HUA1YGR268C 597 nt7.55□□□□□ -1.2
RPL42AP0CX27 SGT2YOR007C 1041 nt7.53□□□□□ -1.2
RPL42AP0CX27 YAT1YAR035W 2064 nt7.52□□□□□ -1.21
RPL42AP0CX27 HIF1YLL022C 1158 nt7.52□□□□□ -1.21
RPL42AP0CX27 SAM35YHR083W 990 nt7.51□□□□□ -1.21
RPL42AP0CX27 INA1YLR413W 2028 nt7.51□□□□□ -1.21
RPL42AP0CX27 PRM5YIL117C 957 nt7.5□□□□□ -1.21
RPL42AP0CX27 LSC2YGR244C 1284 nt7.49□□□□□ -1.21
RPL42AP0CX27 YNL115CYNL115C 1935 nt7.48□□□□□ -1.21
RPL42AP0CX27 SPT20YOL148C 1815 nt7.48□□□□□ -1.21
RPL42AP0CX27 VPS75YNL246W 795 nt7.47□□□□□ -1.21
RPL42AP0CX27 TIR3YIL011W 810 nt7.46□□□□□ -1.22
RPL42AP0CX27 PEX25YPL112C 1185 nt7.46□□□□□ -1.22
RPL42AP0CX27 FRE6YLL051C 2139 nt7.44□□□□□ -1.22
RPL42AP0CX27 UTR1YJR049C 1593 nt7.44□□□□□ -1.22
RPL42AP0CX27 GAP1YKR039W 1809 nt7.43□□□□□ -1.22
RPL42AP0CX27 ZRT3YKL175W 1512 nt7.43□□□□□ -1.22
RPL42AP0CX27 RPM1RPM1 483 nt7.43□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms