Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.69■□□□□ 0.74
Ighv1-12A0A0A6YXJ9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ighv1-12A0A0A6YXJ9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ighv1-12A0A0A6YXJ9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-12A0A0A6YXJ9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-12A0A0A6YXJ9 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.62■□□□□ 0.73
Ighv1-12A0A0A6YXJ9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-12A0A0A6YXJ9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-12A0A0A6YXJ9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv1-12A0A0A6YXJ9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-12A0A0A6YXJ9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv1-12A0A0A6YXJ9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.37■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.35■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-12A0A0A6YXJ9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.33■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Peli2-204ENSMUST00000226513 1320 ntBASIC19.27■□□□□ 0.68
Ighv1-12A0A0A6YXJ9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Gm24804-201ENSMUST00000174982 85 ntBASIC19.25■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.24■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.22■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-12A0A0A6YXJ9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.2■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.18■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-12A0A0A6YXJ9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.1■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-12A0A0A6YXJ9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-12A0A0A6YXJ9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-12A0A0A6YXJ9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ighv1-12A0A0A6YXJ9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-12A0A0A6YXJ9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-12A0A0A6YXJ9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms