Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21,55■■□□□ 1,04
Trav5-4A0A075B652 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21,52■■□□□ 1,04
Trav5-4A0A075B652 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21,52■■□□□ 1,04
Trav5-4A0A075B652 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,51■■□□□ 1,03
Trav5-4A0A075B652 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21,51■■□□□ 1,03
Trav5-4A0A075B652 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,5■■□□□ 1,03
Trav5-4A0A075B652 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21,49■■□□□ 1,03
Trav5-4A0A075B652 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,48■■□□□ 1,03
Trav5-4A0A075B652 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21,48■■□□□ 1,03
Trav5-4A0A075B652 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21,48■■□□□ 1,03
Trav5-4A0A075B652 Gm17082-201ENSMUST00000166043 1091 ntBASIC21,47■■□□□ 1,03
Trav5-4A0A075B652 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Trav5-4A0A075B652 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,46■■□□□ 1,03
Trav5-4A0A075B652 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Trav5-4A0A075B652 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21,46■■□□□ 1,03
Trav5-4A0A075B652 Gm27322-201ENSMUST00000184007 104 ntBASIC21,45■■□□□ 1,02
Trav5-4A0A075B652 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Trav5-4A0A075B652 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Trav5-4A0A075B652 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21,4■■□□□ 1,02
Trav5-4A0A075B652 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21,39■■□□□ 1,01
Trav5-4A0A075B652 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,39■■□□□ 1,01
Trav5-4A0A075B652 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21,38■■□□□ 1,01
Trav5-4A0A075B652 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Trav5-4A0A075B652 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21,38■■□□□ 1,01
Trav5-4A0A075B652 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Trav5-4A0A075B652 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,36■■□□□ 1,01
Trav5-4A0A075B652 AC166822.3-201ENSMUST00000227394 661 ntBASIC21,36■■□□□ 1,01
Trav5-4A0A075B652 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Trav5-4A0A075B652 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Trav5-4A0A075B652 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Trav5-4A0A075B652 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21,3■■□□□ 1
Trav5-4A0A075B652 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21,3■■□□□ 1
Trav5-4A0A075B652 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Trav5-4A0A075B652 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Trav5-4A0A075B652 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21,29■■□□□ 1
Trav5-4A0A075B652 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21,28■■□□□ 1
Trav5-4A0A075B652 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21,28■■□□□ 1
Trav5-4A0A075B652 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Trav5-4A0A075B652 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21,27■□□□□ 0,99
Trav5-4A0A075B652 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21,26■□□□□ 0,99
Trav5-4A0A075B652 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav5-4A0A075B652 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav5-4A0A075B652 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Trav5-4A0A075B652 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Trav5-4A0A075B652 Gm26115-201ENSMUST00000175605 87 ntBASIC21,23■□□□□ 0,99
Trav5-4A0A075B652 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21,22■□□□□ 0,99
Trav5-4A0A075B652 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21,22■□□□□ 0,99
Trav5-4A0A075B652 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21,21■□□□□ 0,99
Trav5-4A0A075B652 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Trav5-4A0A075B652 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21,21■□□□□ 0,99
Trav5-4A0A075B652 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21,2■□□□□ 0,98
Trav5-4A0A075B652 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21,19■□□□□ 0,98
Trav5-4A0A075B652 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Trav5-4A0A075B652 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Trav5-4A0A075B652 Gm8109-201ENSMUST00000194076 746 ntBASIC21,19■□□□□ 0,98
Trav5-4A0A075B652 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Trav5-4A0A075B652 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21,18■□□□□ 0,98
Trav5-4A0A075B652 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Trav5-4A0A075B652 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,98
Trav5-4A0A075B652 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21,13■□□□□ 0,97
Trav5-4A0A075B652 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Trav5-4A0A075B652 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Trav5-4A0A075B652 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav5-4A0A075B652 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav5-4A0A075B652 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav5-4A0A075B652 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Trav5-4A0A075B652 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Trav5-4A0A075B652 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Trav5-4A0A075B652 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21,1■□□□□ 0,97
Trav5-4A0A075B652 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Trav5-4A0A075B652 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Trav5-4A0A075B652 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21,08■□□□□ 0,96
Trav5-4A0A075B652 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21,07■□□□□ 0,96
Trav5-4A0A075B652 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21,06■□□□□ 0,96
Trav5-4A0A075B652 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21,06■□□□□ 0,96
Trav5-4A0A075B652 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Trav5-4A0A075B652 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Trav5-4A0A075B652 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Trav5-4A0A075B652 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Trav5-4A0A075B652 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21,02■□□□□ 0,95
Trav5-4A0A075B652 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Trav5-4A0A075B652 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Trav5-4A0A075B652 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20,98■□□□□ 0,95
Trav5-4A0A075B652 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20,98■□□□□ 0,95
Trav5-4A0A075B652 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Trav5-4A0A075B652 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20,97■□□□□ 0,95
Trav5-4A0A075B652 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20,97■□□□□ 0,95
Trav5-4A0A075B652 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20,96■□□□□ 0,95
Trav5-4A0A075B652 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20,96■□□□□ 0,95
Trav5-4A0A075B652 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20,96■□□□□ 0,95
Trav5-4A0A075B652 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20,93■□□□□ 0,94
Trav5-4A0A075B652 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20,93■□□□□ 0,94
Trav5-4A0A075B652 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20,93■□□□□ 0,94
Trav5-4A0A075B652 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20,92■□□□□ 0,94
Trav5-4A0A075B652 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20,92■□□□□ 0,94
Trav5-4A0A075B652 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20,92■□□□□ 0,94
Trav5-4A0A075B652 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20,91■□□□□ 0,94
Trav5-4A0A075B652 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Trav5-4A0A075B652 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Trav5-4A0A075B652 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20,9■□□□□ 0,94
Retrieved 100 of 76,532 protein–RNA pairs in 22,1 ms