Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AL356653.1-201ENST00000402743 360 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 TULP3P1-202ENST00000453253 1291 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 GYG1-209ENST00000483267 801 ntTSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 RN7SL646P-201ENST00000492969 297 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 KRT18P42-201ENST00000505048 1255 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AC120498.5-201ENST00000561757 299 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 METTL23-211ENST00000589977 617 ntTSL 3 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AP001462.1-201ENST00000594089 452 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 LINC00643-207ENST00000637212 734 ntBASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC20.03■□□□□ 0.8
SHANK2Q9UPX8 AC011239.2-201ENST00000624820 1489 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 AC009474.1-201ENST00000455096 1565 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 RFNG-202ENST00000429557 994 ntTSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 HNRNPA1P4-201ENST00000509706 756 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 NAT9-219ENST00000582524 573 ntTSL 4 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ACTBP9-201ENST00000587663 1099 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 AC092535.4-201ENST00000609548 397 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 BX322562.1-201ENST00000617004 561 ntBASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC20.02■□□□□ 0.8
SHANK2Q9UPX8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
SHANK2Q9UPX8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHANK2Q9UPX8 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC20.02■□□□□ 0.79
SHANK2Q9UPX8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 IQCF4-203ENST00000428561 420 ntBASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 RN7SL672P-201ENST00000474091 317 ntBASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AC022447.5-201ENST00000504817 392 ntBASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 AC012146.4-201ENST00000575546 271 ntBASIC20.01■□□□□ 0.79
SHANK2Q9UPX8 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms