Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CICP17-201ENST00000418553 2377 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC092570.1-201ENST00000414446 469 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC104961.1-201ENST00000427605 771 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 NRADDP-201ENST00000437305 691 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 RPL3P5-201ENST00000441645 1232 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 TBC1D3P6-201ENST00000505954 962 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 MIR5001-201ENST00000580185 100 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 COL6A4P2-202ENST00000504443 2753 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 NRADDP-202ENST00000641269 1585 ntBASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DNMT3BQ9UBC3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 U3.5-201ENST00000363448 216 ntBASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC092810.2-201ENST00000431570 362 ntBASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ALG1L7P-201ENST00000502317 768 ntBASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms