Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 Z98259.2-201ENST00000641583 609 ntBASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 AHCYP2-201ENST00000430630 1300 ntBASIC12.05□□□□□ -0.48
NICN1Q9BSH3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NICN1Q9BSH3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 FMO6P-201ENST00000236166 1620 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 GHET1-201ENST00000627071 1906 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 SNORA50C-201ENST00000408535 133 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AC100850.1-201ENST00000506768 649 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 BTNL10-201ENST00000595971 695 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AL591471.1-201ENST00000621855 229 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 SNORA50.1-201ENST00000628590 135 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CYP4F23P-201ENST00000593402 1579 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 AL139385.1-201ENST00000611744 3272 ntBASIC12.04□□□□□ -0.48
NICN1Q9BSH3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NICN1Q9BSH3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.03□□□□□ -0.48
NICN1Q9BSH3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NICN1Q9BSH3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms