Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.02□□□□□ -0.33
HPS1Q92902 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.02□□□□□ -0.33
HPS1Q92902 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HPS1Q92902 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HPS1Q92902 AL645937.2-201ENST00000396808 931 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 BCRP2-202ENST00000447763 634 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.01□□□□□ -0.33
HPS1Q92902 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.01□□□□□ -0.33
HPS1Q92902 BCRP6-201ENST00000510112 632 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 BCRP7-201ENST00000511549 544 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC13.01□□□□□ -0.33
HPS1Q92902 AP000812.2-201ENST00000538934 718 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
HPS1Q92902 AC109809.1-201ENST00000619665 545 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 BX539320.1-201ENST00000623759 877 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 AC006927.4-201ENST00000639187 543 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 TUBB1P2-201ENST00000422712 1306 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 TUBB1P1-201ENST00000503144 1300 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 AL138799.1-201ENST00000448213 1675 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HPS1Q92902 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC13.01□□□□□ -0.33
HPS1Q92902 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 AC092117.1-201ENST00000621230 3250 ntBASIC13.01□□□□□ -0.33
HPS1Q92902 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HPS1Q92902 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HPS1Q92902 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 AGGF1P1-201ENST00000509500 2073 ntBASIC13□□□□□ -0.33
HPS1Q92902 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13□□□□□ -0.33
HPS1Q92902 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 Z98257.2-202ENST00000641138 1548 ntBASIC13□□□□□ -0.33
HPS1Q92902 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13□□□□□ -0.33
HPS1Q92902 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HPS1Q92902 ZBTB12BP-201ENST00000314232 1122 ntBASIC13□□□□□ -0.33
HPS1Q92902 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms