Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC4Q92889 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC4Q92889 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC4Q92889 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC4Q92889 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC4Q92889 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC4Q92889 AC025183.3-201ENST00000623526 1482 ntBASIC15.91■□□□□ 0.14
ERCC4Q92889 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.9■□□□□ 0.14
ERCC4Q92889 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
ERCC4Q92889 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 AC103592.1-201ENST00000394513 664 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 AC099336.1-201ENST00000417053 1171 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 AC136604.1-202ENST00000425471 771 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.9■□□□□ 0.14
ERCC4Q92889 AC012441.2-201ENST00000444843 739 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 RNMTL1P1-201ENST00000454103 560 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ERCC4Q92889 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
ERCC4Q92889 KRT17P8-201ENST00000540749 863 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.9■□□□□ 0.14
ERCC4Q92889 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 AC244157.2-201ENST00000616239 1006 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 MIR6775-201ENST00000617557 69 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 AL591471.1-201ENST00000621855 229 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 AC092053.3-201ENST00000641308 4975 ntBASIC15.9■□□□□ 0.14
ERCC4Q92889 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
ERCC4Q92889 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC4Q92889 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC4Q92889 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC15.89■□□□□ 0.14
ERCC4Q92889 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
ERCC4Q92889 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
ERCC4Q92889 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ERCC4Q92889 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC4Q92889 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ERCC4Q92889 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC4Q92889 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ERCC4Q92889 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 AC008620.2-201ENST00000510294 1569 ntBASIC15.89■□□□□ 0.13
ERCC4Q92889 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
ERCC4Q92889 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC4Q92889 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 AC079776.1-201ENST00000401540 1152 ntBASIC15.89■□□□□ 0.13
ERCC4Q92889 MIR1909-201ENST00000411312 80 ntBASIC15.89■□□□□ 0.13
ERCC4Q92889 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ERCC4Q92889 VDAC1P1-201ENST00000439229 848 ntBASIC15.89■□□□□ 0.13
ERCC4Q92889 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC4Q92889 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.89■□□□□ 0.13
ERCC4Q92889 RPL18P13-201ENST00000478088 569 ntBASIC15.89■□□□□ 0.13
ERCC4Q92889 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.89■□□□□ 0.13
ERCC4Q92889 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC4Q92889 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms