Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AC099521.3-201ENST00000624251 2938 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AC007274.2-201ENST00000421675 662 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 PPP1R2P4-201ENST00000424051 595 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AC136604.1-202ENST00000425471 771 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 PDIA3P2-201ENST00000428073 158 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AC114947.1-202ENST00000514136 344 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AC026803.1-201ENST00000569130 274 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 AL358781.1-202ENST00000321081 1360 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 NRADDP-202ENST00000641269 1585 ntBASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDH19Q8TAB3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AC026320.2-201ENST00000434379 478 ntBASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AC134698.3-201ENST00000523880 214 ntBASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AL356740.1-201ENST00000602192 1297 ntBASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms