Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CFAP61Q8NHU2 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 TNRC18P1-201ENST00000502875 3650 ntBASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CFAP61Q8NHU2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AL157407.1-201ENST00000435784 904 ntBASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AC104306.2-201ENST00000451877 341 ntBASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AC007663.3-201ENST00000609632 465 ntBASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CFAP61Q8NHU2 AL355102.3-201ENST00000554299 1678 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 MIR663B-201ENST00000408361 115 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 MIR1908-201ENST00000410394 80 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AC007274.1-201ENST00000439805 662 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AL645933.1-201ENST00000440087 609 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AC012441.2-201ENST00000444843 739 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AL591846.1-201ENST00000451736 433 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 AC008805.1-201ENST00000590892 364 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CFAP61Q8NHU2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms