Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 PDIA3P1-201ENST00000471856 1510 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 MIR1233-2-201ENST00000408138 82 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 MIR1233-1-201ENST00000408722 82 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 DFFBP1-201ENST00000433250 979 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 RN7SL48P-201ENST00000579283 293 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 CU634019.7-201ENST00000624153 1185 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 FP236241.2-201ENST00000624906 1185 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AC018445.4-201ENST00000624066 2291 ntBASIC12.13□□□□□ -0.47
BEST4Q8NFU0 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BEST4Q8NFU0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC010336.1-201ENST00000539278 4739 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AL035414.1-201ENST00000451327 857 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.12□□□□□ -0.47
BEST4Q8NFU0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.12□□□□□ -0.47
BEST4Q8NFU0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms