Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LRRC28Q86X40 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LRRC28Q86X40 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 AC106818.1-201ENST00000623223 3242 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 MIR326-201ENST00000362220 95 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 AC079178.1-201ENST00000420915 656 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 GOLGA2P4-201ENST00000441462 777 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 CHMP1AP1-201ENST00000445563 662 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 FAM86HP-204ENST00000513466 959 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 AC009955.4-201ENST00000597192 544 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 AC091271.1-201ENST00000611877 1162 ntBASIC12.52□□□□□ -0.41
LRRC28Q86X40 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.52□□□□□ -0.41
LRRC28Q86X40 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LRRC28Q86X40 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 RN7SKP175-201ENST00000408472 289 ntBASIC12.51□□□□□ -0.41
LRRC28Q86X40 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AC003958.1-201ENST00000435883 421 ntBASIC12.51□□□□□ -0.41
LRRC28Q86X40 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 BX088702.1-201ENST00000610784 235 ntBASIC12.51□□□□□ -0.41
LRRC28Q86X40 MIR6869-201ENST00000619434 62 ntBASIC12.51□□□□□ -0.41
LRRC28Q86X40 CR392039.2-201ENST00000623182 509 ntBASIC12.51□□□□□ -0.41
LRRC28Q86X40 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LRRC28Q86X40 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 AC002350.2-201ENST00000623894 1828 ntBASIC12.51□□□□□ -0.41
LRRC28Q86X40 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
LRRC28Q86X40 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms