Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 LINC01230-201ENST00000625222 3017 ntBASIC13.13□□□□□ -0.31
CDCP2Q5VXM1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 AC079781.5-202ENST00000641784 3743 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 AC005840.4-201ENST00000541242 2494 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 KRT18P33-201ENST00000398525 1043 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 RPSAP70-201ENST00000504462 864 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 SRPK2P-201ENST00000523408 1100 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 URB1-AS1-201ENST00000534991 831 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 AC015656.1-201ENST00000624209 3578 ntBASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CDCP2Q5VXM1 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AL773545.2-201ENST00000442149 472 ntBASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AP000533.1-201ENST00000456143 1177 ntBASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 RPL29P2-201ENST00000488409 460 ntBASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC13.11□□□□□ -0.31
CDCP2Q5VXM1 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms