Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.26□□□□□ -0.29
GABREP78334 SNX18-202ENST00000343017 3140 ntBASIC13.26□□□□□ -0.29
GABREP78334 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GABREP78334 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
GABREP78334 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GABREP78334 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.26□□□□□ -0.29
GABREP78334 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GABREP78334 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.26□□□□□ -0.29
GABREP78334 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.26□□□□□ -0.29
GABREP78334 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 AC007614.4-201ENST00000564048 1827 ntBASIC13.25□□□□□ -0.29
GABREP78334 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.25□□□□□ -0.29
GABREP78334 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
GABREP78334 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.25□□□□□ -0.29
GABREP78334 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.25□□□□□ -0.29
GABREP78334 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.25□□□□□ -0.29
GABREP78334 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.25□□□□□ -0.29
GABREP78334 BCL2L12P1-201ENST00000508390 733 ntBASIC13.25□□□□□ -0.29
GABREP78334 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.25□□□□□ -0.29
GABREP78334 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 AL590235.1-201ENST00000564650 861 ntBASIC13.25□□□□□ -0.29
GABREP78334 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.25□□□□□ -0.29
GABREP78334 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 URAHP-205ENST00000610227 398 ntBASIC13.25□□□□□ -0.29
GABREP78334 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
GABREP78334 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.25□□□□□ -0.29
GABREP78334 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
GABREP78334 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GABREP78334 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 AL590824.1-201ENST00000403828 1349 ntBASIC13.24□□□□□ -0.29
GABREP78334 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.24□□□□□ -0.29
GABREP78334 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.24□□□□□ -0.29
GABREP78334 IFNWP2-201ENST00000431203 580 ntBASIC13.24□□□□□ -0.29
GABREP78334 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GABREP78334 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.24□□□□□ -0.29
GABREP78334 AC027612.2-202ENST00000445955 1199 ntBASIC13.24□□□□□ -0.29
GABREP78334 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 COQ10BP2-201ENST00000513804 724 ntBASIC13.24□□□□□ -0.29
GABREP78334 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.24□□□□□ -0.29
GABREP78334 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.24□□□□□ -0.29
GABREP78334 AC004686.1-201ENST00000605113 538 ntBASIC13.24□□□□□ -0.29
GABREP78334 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.24□□□□□ -0.29
GABREP78334 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.24□□□□□ -0.29
GABREP78334 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms