Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LAP3P2-201ENST00000454686 1454 ntBASIC12.08□□□□□ -0.47
ACTBP60709 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ACTBP60709 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ACTBP60709 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 AC022364.1-202ENST00000617468 2409 ntBASIC12.08□□□□□ -0.48
ACTBP60709 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 AL512384.1-201ENST00000406683 331 ntBASIC12.08□□□□□ -0.48
ACTBP60709 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.08□□□□□ -0.48
ACTBP60709 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 TTTY23B-201ENST00000442790 549 ntBASIC12.08□□□□□ -0.48
ACTBP60709 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ACTBP60709 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.08□□□□□ -0.48
ACTBP60709 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.08□□□□□ -0.48
ACTBP60709 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.08□□□□□ -0.48
ACTBP60709 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
ACTBP60709 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 AC145423.3-201ENST00000615987 467 ntBASIC12.08□□□□□ -0.48
ACTBP60709 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.08□□□□□ -0.48
ACTBP60709 RPSAP52-203ENST00000622976 1023 ntBASIC12.08□□□□□ -0.48
ACTBP60709 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
ACTBP60709 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 AC102953.2-201ENST00000609755 3026 ntBASIC12.08□□□□□ -0.48
ACTBP60709 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ACTBP60709 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ACTBP60709 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
ACTBP60709 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.07□□□□□ -0.48
ACTBP60709 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 AC009093.2-202ENST00000620513 2079 ntBASIC12.07□□□□□ -0.48
ACTBP60709 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.07□□□□□ -0.48
ACTBP60709 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.07□□□□□ -0.48
ACTBP60709 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.07□□□□□ -0.48
ACTBP60709 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.07□□□□□ -0.48
ACTBP60709 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.07□□□□□ -0.48
ACTBP60709 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
ACTBP60709 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ACTBP60709 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.07□□□□□ -0.48
ACTBP60709 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.07□□□□□ -0.48
ACTBP60709 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.07□□□□□ -0.48
ACTBP60709 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms