Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN17P56750 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN17P56750 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN17P56750 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN17P56750 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN17P56750 MARK2P16-201ENST00000605714 1723 ntBASIC12.51□□□□□ -0.41
CLDN17P56750 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CLDN17P56750 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN17P56750 AC073548.1-201ENST00000624088 1882 ntBASIC12.51□□□□□ -0.41
CLDN17P56750 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 MIR645-201ENST00000385283 94 ntBASIC12.5□□□□□ -0.41
CLDN17P56750 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN17P56750 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN17P56750 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN17P56750 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN17P56750 AC026803.1-201ENST00000569130 274 ntBASIC12.5□□□□□ -0.41
CLDN17P56750 MIR497HG-202ENST00000572453 3838 ntBASIC12.5□□□□□ -0.41
CLDN17P56750 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 MIR4754-201ENST00000582477 89 ntBASIC12.5□□□□□ -0.41
CLDN17P56750 CU633904.3-201ENST00000624042 1029 ntBASIC12.5□□□□□ -0.41
CLDN17P56750 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 KRT8P43-201ENST00000406052 1458 ntBASIC12.5□□□□□ -0.41
CLDN17P56750 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CLDN17P56750 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CLDN17P56750 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CLDN17P56750 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CLDN17P56750 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN17P56750 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN17P56750 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLDN17P56750 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLDN17P56750 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CLDN17P56750 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN17P56750 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN17P56750 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.49□□□□□ -0.41
CLDN17P56750 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CLDN17P56750 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.49□□□□□ -0.41
CLDN17P56750 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 MARK2P9-201ENST00000430958 1727 ntBASIC12.49□□□□□ -0.41
CLDN17P56750 SALL4P6-201ENST00000429385 1691 ntBASIC12.49□□□□□ -0.41
CLDN17P56750 AC093462.1-201ENST00000621167 1683 ntBASIC12.49□□□□□ -0.41
CLDN17P56750 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 KRT8P31-201ENST00000504812 1408 ntBASIC12.49□□□□□ -0.41
CLDN17P56750 FAM90A2P-201ENST00000511144 1395 ntBASIC12.49□□□□□ -0.41
CLDN17P56750 FAM90A25P-201ENST00000528404 1395 ntBASIC12.49□□□□□ -0.41
CLDN17P56750 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLDN17P56750 AL583805.1-201ENST00000391389 531 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms