Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 ZSCAN5DP-201ENST00000600684 1488 ntBASIC20.16■□□□□ 0.82
KDM5CP41229 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KDM5CP41229 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 MST1P2-201ENST00000457982 2291 ntBASIC20.16■□□□□ 0.82
KDM5CP41229 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KDM5CP41229 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KDM5CP41229 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 TUBB8P9-201ENST00000422534 1276 ntBASIC20.16■□□□□ 0.82
KDM5CP41229 TUBB8P10-201ENST00000430210 1279 ntBASIC20.16■□□□□ 0.82
KDM5CP41229 TMEM256P1-201ENST00000430550 340 ntBASIC20.16■□□□□ 0.82
KDM5CP41229 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC20.16■□□□□ 0.82
KDM5CP41229 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC20.16■□□□□ 0.82
KDM5CP41229 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC20.16■□□□□ 0.82
KDM5CP41229 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC20.16■□□□□ 0.82
KDM5CP41229 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC20.15■□□□□ 0.82
KDM5CP41229 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KDM5CP41229 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.15■□□□□ 0.82
KDM5CP41229 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
KDM5CP41229 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KDM5CP41229 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
KDM5CP41229 PPP1R2P10-201ENST00000393023 595 ntBASIC20.15■□□□□ 0.82
KDM5CP41229 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC20.15■□□□□ 0.82
KDM5CP41229 MIR6165-201ENST00000614803 84 ntBASIC20.15■□□□□ 0.82
KDM5CP41229 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KDM5CP41229 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC20.15■□□□□ 0.82
KDM5CP41229 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC20.15■□□□□ 0.82
KDM5CP41229 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
KDM5CP41229 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDM5CP41229 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KDM5CP41229 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
KDM5CP41229 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC20.14■□□□□ 0.82
KDM5CP41229 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.14■□□□□ 0.81
KDM5CP41229 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC20.14■□□□□ 0.81
KDM5CP41229 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC20.14■□□□□ 0.81
KDM5CP41229 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC20.14■□□□□ 0.81
KDM5CP41229 MIR5193-201ENST00000584510 109 ntBASIC20.14■□□□□ 0.81
KDM5CP41229 AC112702.1-201ENST00000623712 366 ntBASIC20.14■□□□□ 0.81
KDM5CP41229 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC20.14■□□□□ 0.81
KDM5CP41229 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC20.14■□□□□ 0.81
KDM5CP41229 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC20.14■□□□□ 0.81
KDM5CP41229 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC20.14■□□□□ 0.81
KDM5CP41229 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KDM5CP41229 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
KDM5CP41229 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC20.14■□□□□ 0.81
KDM5CP41229 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC20.14■□□□□ 0.81
KDM5CP41229 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDM5CP41229 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDM5CP41229 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDM5CP41229 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDM5CP41229 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDM5CP41229 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDM5CP41229 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KDM5CP41229 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KDM5CP41229 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC20.13■□□□□ 0.81
KDM5CP41229 AC010997.1-201ENST00000447646 350 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 AC005011.1-201ENST00000455206 210 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC20.13■□□□□ 0.81
KDM5CP41229 HNRNPA1P55-201ENST00000505935 955 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 AC010395.2-201ENST00000509899 904 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC20.13■□□□□ 0.81
KDM5CP41229 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC20.13■□□□□ 0.81
KDM5CP41229 MIR4309-201ENST00000582498 83 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC20.13■□□□□ 0.81
KDM5CP41229 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
KDM5CP41229 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 AC117500.5-201ENST00000623233 527 ntBASIC20.13■□□□□ 0.81
KDM5CP41229 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC20.13■□□□□ 0.81
KDM5CP41229 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms