Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COL15A1P39059 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL15A1P39059 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.35■□□□□ 0.37
COL15A1P39059 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COL15A1P39059 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.35■□□□□ 0.37
COL15A1P39059 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.35■□□□□ 0.37
COL15A1P39059 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 AL773545.2-201ENST00000442149 472 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 AC005077.3-201ENST00000449614 213 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC17.35■□□□□ 0.37
COL15A1P39059 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.35■□□□□ 0.37
COL15A1P39059 PRR20FP-201ENST00000603320 180 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 AC080013.5-201ENST00000607044 679 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.35■□□□□ 0.37
COL15A1P39059 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.35■□□□□ 0.37
COL15A1P39059 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.35■□□□□ 0.37
COL15A1P39059 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.35■□□□□ 0.37
COL15A1P39059 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.35■□□□□ 0.37
COL15A1P39059 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 KRT8P25-201ENST00000473150 1456 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 AC024075.2-201ENST00000598112 1473 ntBASIC17.35■□□□□ 0.37
COL15A1P39059 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL15A1P39059 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.34■□□□□ 0.37
COL15A1P39059 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC17.34■□□□□ 0.37
COL15A1P39059 KRT8P38-201ENST00000441370 1430 ntBASIC17.34■□□□□ 0.37
COL15A1P39059 PSME2P2-201ENST00000453033 700 ntBASIC17.34■□□□□ 0.37
COL15A1P39059 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.34■□□□□ 0.37
COL15A1P39059 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.34■□□□□ 0.37
COL15A1P39059 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 AC005746.3-201ENST00000614751 393 ntBASIC17.34■□□□□ 0.37
COL15A1P39059 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
COL15A1P39059 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
COL15A1P39059 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL15A1P39059 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC17.34■□□□□ 0.37
COL15A1P39059 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COL15A1P39059 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL15A1P39059 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC17.33■□□□□ 0.37
COL15A1P39059 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL15A1P39059 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL15A1P39059 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.33■□□□□ 0.37
COL15A1P39059 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.33■□□□□ 0.37
COL15A1P39059 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC17.33■□□□□ 0.36
COL15A1P39059 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms