Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CD40P25942 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 DKKL1P1-201ENST00000400550 698 ntBASIC12.02□□□□□ -0.49
CD40P25942 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 AL357563.1-201ENST00000404728 395 ntBASIC12.02□□□□□ -0.49
CD40P25942 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.02□□□□□ -0.49
CD40P25942 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 EEF1DP2-201ENST00000433698 843 ntBASIC12.02□□□□□ -0.49
CD40P25942 GNG10P1-201ENST00000452289 199 ntBASIC12.02□□□□□ -0.49
CD40P25942 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.02□□□□□ -0.49
CD40P25942 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.02□□□□□ -0.49
CD40P25942 AC006529.1-201ENST00000459978 637 ntBASIC12.02□□□□□ -0.49
CD40P25942 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.02□□□□□ -0.49
CD40P25942 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 AC025186.1-201ENST00000478174 870 ntBASIC12.02□□□□□ -0.49
CD40P25942 EEF1GP8-201ENST00000506566 1154 ntBASIC12.02□□□□□ -0.49
CD40P25942 AC084752.1-201ENST00000509766 622 ntBASIC12.02□□□□□ -0.49
CD40P25942 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.02□□□□□ -0.49
CD40P25942 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 CR392039.2-201ENST00000623182 509 ntBASIC12.02□□□□□ -0.49
CD40P25942 AC009084.3-201ENST00000623356 437 ntBASIC12.02□□□□□ -0.49
CD40P25942 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.02□□□□□ -0.49
CD40P25942 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.02□□□□□ -0.49
CD40P25942 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.02□□□□□ -0.49
CD40P25942 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CD40P25942 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD40P25942 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD40P25942 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
CD40P25942 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CD40P25942 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
CD40P25942 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 AC093462.1-201ENST00000621167 1683 ntBASIC12.01□□□□□ -0.49
CD40P25942 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CD40P25942 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 AL031595.1-201ENST00000623969 4709 ntBASIC12.01□□□□□ -0.49
CD40P25942 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CD40P25942 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CD40P25942 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.01□□□□□ -0.49
CD40P25942 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.01□□□□□ -0.49
CD40P25942 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.01□□□□□ -0.49
CD40P25942 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.01□□□□□ -0.49
CD40P25942 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.01□□□□□ -0.49
CD40P25942 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.01□□□□□ -0.49
CD40P25942 LINC00634-202ENST00000505157 222 ntBASIC12.01□□□□□ -0.49
CD40P25942 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.01□□□□□ -0.49
CD40P25942 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.01□□□□□ -0.49
CD40P25942 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.01□□□□□ -0.49
CD40P25942 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.01□□□□□ -0.49
CD40P25942 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CD40P25942 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CD40P25942 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CD40P25942 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.01□□□□□ -0.49
CD40P25942 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD40P25942 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms