Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.16□□□□□ -0.14
CCND1P24385 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 AC012441.2-201ENST00000444843 739 ntBASIC14.16□□□□□ -0.14
CCND1P24385 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.16□□□□□ -0.14
CCND1P24385 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.16□□□□□ -0.14
CCND1P24385 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.16□□□□□ -0.14
CCND1P24385 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.16□□□□□ -0.14
CCND1P24385 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 AC100827.2-201ENST00000563214 1194 ntBASIC14.16□□□□□ -0.14
CCND1P24385 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.16□□□□□ -0.14
CCND1P24385 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCND1P24385 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 PCDHB17P-202ENST00000623466 3066 ntBASIC14.16□□□□□ -0.14
CCND1P24385 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCND1P24385 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.16□□□□□ -0.14
CCND1P24385 TUBB8P4-201ENST00000511806 1324 ntBASIC14.15□□□□□ -0.14
CCND1P24385 AC064801.2-201ENST00000625052 1303 ntBASIC14.15□□□□□ -0.14
CCND1P24385 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 E2F3P2-201ENST00000447755 1422 ntBASIC14.15□□□□□ -0.14
CCND1P24385 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 DDX12P-201ENST00000432996 2947 ntBASIC14.15□□□□□ -0.14
CCND1P24385 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCND1P24385 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.15□□□□□ -0.14
CCND1P24385 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 AL157407.1-201ENST00000435784 904 ntBASIC14.15□□□□□ -0.14
CCND1P24385 MTX1P1-201ENST00000440904 838 ntBASIC14.15□□□□□ -0.14
CCND1P24385 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.15□□□□□ -0.14
CCND1P24385 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CCND1P24385 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.15□□□□□ -0.14
CCND1P24385 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.15□□□□□ -0.14
CCND1P24385 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.15□□□□□ -0.14
CCND1P24385 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.15□□□□□ -0.14
CCND1P24385 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.15□□□□□ -0.14
CCND1P24385 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.15□□□□□ -0.14
CCND1P24385 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCND1P24385 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
CCND1P24385 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CCND1P24385 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCND1P24385 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCND1P24385 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCND1P24385 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCND1P24385 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCND1P24385 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCND1P24385 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms