Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
COL6A2P12110 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
COL6A2P12110 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.84□□□□□ -0.19
COL6A2P12110 TSPY25P-201ENST00000429463 745 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.84□□□□□ -0.19
COL6A2P12110 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.84□□□□□ -0.19
COL6A2P12110 AC005225.4-201ENST00000557330 545 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 RAB43P1-201ENST00000561790 589 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 AC005730.2-201ENST00000564549 1184 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.84□□□□□ -0.19
COL6A2P12110 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 AL136295.7-201ENST00000619226 1200 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COL6A2P12110 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.84□□□□□ -0.19
COL6A2P12110 AC104758.3-203ENST00000562938 2123 ntBASIC13.84□□□□□ -0.19
COL6A2P12110 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL6A2P12110 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
COL6A2P12110 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
COL6A2P12110 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COL6A2P12110 AC008040.5-201ENST00000599781 1781 ntBASIC13.83□□□□□ -0.19
COL6A2P12110 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
COL6A2P12110 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
COL6A2P12110 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 AC004554.1-201ENST00000422830 1468 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 ANKRD19P-201ENST00000338192 862 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.83□□□□□ -0.2
COL6A2P12110 TUBB2BP1-201ENST00000404155 871 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 MTX1P1-201ENST00000440904 838 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.83□□□□□ -0.2
COL6A2P12110 RPSAP36-202ENST00000494591 1261 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.83□□□□□ -0.2
COL6A2P12110 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.83□□□□□ -0.2
COL6A2P12110 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.83□□□□□ -0.2
COL6A2P12110 RN7SL163P-201ENST00000583100 276 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 MIR3188-201ENST00000583494 85 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC239800.4-201ENST00000603712 296 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC022748.3-201ENST00000621828 275 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 AC068587.8-201ENST00000641239 219 ntBASIC13.83□□□□□ -0.2
COL6A2P12110 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COL6A2P12110 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
COL6A2P12110 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.83□□□□□ -0.2
COL6A2P12110 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms