Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN5O00501 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN5O00501 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN5O00501 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN5O00501 AC117503.4-201ENST00000623229 1418 ntBASIC14.68□□□□□ -0.06
CLDN5O00501 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CLDN5O00501 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.68□□□□□ -0.06
CLDN5O00501 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN5O00501 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN5O00501 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN5O00501 AP003398.1-201ENST00000531124 318 ntBASIC14.68□□□□□ -0.06
CLDN5O00501 MIR4326-201ENST00000582203 59 ntBASIC14.68□□□□□ -0.06
CLDN5O00501 AC012073.1-201ENST00000606114 1108 ntBASIC14.68□□□□□ -0.06
CLDN5O00501 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN5O00501 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.68□□□□□ -0.06
CLDN5O00501 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN5O00501 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLDN5O00501 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CLDN5O00501 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN5O00501 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN5O00501 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN5O00501 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN5O00501 AL359881.3-201ENST00000602640 1721 ntBASIC14.67□□□□□ -0.06
CLDN5O00501 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLDN5O00501 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 OR2W2P-201ENST00000406313 909 ntBASIC14.67□□□□□ -0.06
CLDN5O00501 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN5O00501 AC100858.1-201ENST00000514059 1228 ntBASIC14.67□□□□□ -0.06
CLDN5O00501 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN5O00501 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.67□□□□□ -0.06
CLDN5O00501 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLDN5O00501 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.67□□□□□ -0.06
CLDN5O00501 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLDN5O00501 AC040160.2-201ENST00000623816 1675 ntBASIC14.67□□□□□ -0.06
CLDN5O00501 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CLDN5O00501 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN5O00501 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CLDN5O00501 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN5O00501 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN5O00501 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN5O00501 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN5O00501 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLDN5O00501 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.66□□□□□ -0.06
CLDN5O00501 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms