Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 DGCR5-201ENST00000399539 862 ntBASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 TP53TG3HP-202ENST00000569755 579 ntBASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
UBE2D4Q9Y2X8 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 AC022364.1-202ENST00000617468 2409 ntBASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
UBE2D4Q9Y2X8 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 CNN2P8-201ENST00000421872 913 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AC016694.1-201ENST00000434179 700 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 HIST2H2BB-201ENST00000449108 381 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 FTH1P14-201ENST00000482930 551 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 PGAM1P5-201ENST00000548011 764 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AC003686.1-201ENST00000550956 1034 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 C2orf69P2-201ENST00000562032 1123 ntBASIC9.77□□□□□ -0.85
UBE2D4Q9Y2X8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms