Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 Z98259.1-201ENST00000564261 1697 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 COX17-201ENST00000261070 684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 HLA-DRA-201ENST00000374982 1169 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 PPIL3-204ENST00000409361 897 ntTSL 3 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC008940.1-201ENST00000438117 785 ntTSL 5 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AL158824.1-201ENST00000451825 450 ntBASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC20.86■□□□□ 0.93
RIMBP3Q9UFD9 RHPN1-AS1-201ENST00000518049 1918 ntBASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 AL590552.1-201ENST00000623164 1770 ntBASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 PLA2G1B-201ENST00000308366 565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 RPS18-233ENST00000474973 589 ntTSL 2 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 AC006557.1-201ENST00000591211 1085 ntBASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 ALOX15P2-201ENST00000340858 1897 ntBASIC20.85■□□□□ 0.93
RIMBP3Q9UFD9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 AL162727.3-201ENST00000635661 2787 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 KRT8P46-201ENST00000512037 1426 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 PTPN2P2-201ENST00000433704 1024 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 AL160270.1-201ENST00000439960 631 ntTSL 5 BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 IGLCOR22-1-201ENST00000523725 316 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 CLEC4M-210ENST00000597522 811 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 AL589843.2-202ENST00000602289 740 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 AC027281.2-201ENST00000623856 713 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 AC008993.1-201ENST00000632280 776 ntBASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 ACRBP-202ENST00000414226 1700 ntTSL 2 BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIMBP3Q9UFD9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 AL365366.1-201ENST00000414898 853 ntBASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 PRDX2P2-201ENST00000451920 587 ntBASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 AC093871.1-201ENST00000503815 534 ntTSL 2 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 FAM25BP-203ENST00000624613 404 ntTSL 3 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 AC006262.1-201ENST00000593980 1316 ntTSL 5 BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIMBP3Q9UFD9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RIMBP3Q9UFD9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIMBP3Q9UFD9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RIMBP3Q9UFD9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIMBP3Q9UFD9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIMBP3Q9UFD9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIMBP3Q9UFD9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC20.82■□□□□ 0.92
RIMBP3Q9UFD9 AC015911.7-201ENST00000587542 958 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms