Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 Z82170.1-201ENST00000625081 3192 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 MST1P2-201ENST00000457982 2291 ntBASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.62□□□□□ -0.39
PARPBPQ9NWS1 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 KRT8P24-201ENST00000560290 1559 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PHBP15-201ENST00000574228 665 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AC020922.3-201ENST00000595064 547 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AL353770.1-201ENST00000614915 403 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AC011474.4-201ENST00000623523 2076 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PCDHA5-203ENST00000614258 4248 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 OR2I1P-208ENST00000641137 4948 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 AC073869.1-201ENST00000415574 2762 ntBASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PARPBPQ9NWS1 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.6□□□□□ -0.39
PARPBPQ9NWS1 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms