Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 BAK1P1-201ENST00000317045 636 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 GEMIN8P4-201ENST00000380526 729 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 RN7SL582P-201ENST00000491078 279 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AC106047.2-201ENST00000511723 743 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 GOLGA2P7-209ENST00000560408 745 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 HMGB1P24-201ENST00000611897 328 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AL109809.1-201ENST00000418979 1367 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AL513497.1-201ENST00000624273 2083 ntBASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
KIAA1549Q9HCM3 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 AC092115.1-201ENST00000566277 1402 ntBASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 C8orf49-201ENST00000525043 1968 ntBASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 DKKL1P1-201ENST00000400550 698 ntBASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 AC092862.1-201ENST00000541534 533 ntBASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 AC023968.2-201ENST00000560593 1049 ntBASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
KIAA1549Q9HCM3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
KIAA1549Q9HCM3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms